Gene ontology annotations for TAX1BP1
Experiment description of studies that identified TAX1BP1 in exosomes
1
Experiment ID
489
MISEV standards
✔
EM
Biophysical techniques
✔
Cd9|Cd81|Cd63|Gapdh|Sdcbp|Lamp1|Aqp1|Rab5a|Icam1|Cd82|Itga2b|Tsg101|Lamp2|Rab35|Flot1|Flot2|Cd151|Rab5b|Tfrc|Uchl1
Enriched markers
✔
Canx
Negative markers
✔
NTA
Particle analysis
Identified molecule
Protein
Identification method
Mass spectrometry
PubMed ID
36408942
Organism
Rattus norvegicus
Experiment description
Quantitative proteomic analysis of exosomes from umbilical cord mesenchymal stem cells and rat bone marrow stem cells
Authors
"Xu X, Yin F, Guo M, Gan G, Lin G, Wen C, Wang J, Song P, Wang J, Qi ZQ, Zhong CQ."
Journal name
Proteomics
Publication year
2023
Sample
Bone marrow mesenchymal stem cells
Sample name
BMSC - Passage 6
Isolation/purification methods
Differential centrifugation Filtration Ultracentrifugation
Flotation density
-
Molecules identified in the study
Protein
Methods used in the study
Western blotting Mass spectometry
2
Experiment ID
490
MISEV standards
✔
EM
Biophysical techniques
✔
Cd9|Cd81|Cd63|Gapdh|Sdcbp|Lamp1|Aqp1|Rab5a|Icam1|Cd82|Itga2b|Tsg101|Lamp2|Rab35|Flot1|Flot2|Cd151|Rab5b|Tfrc|Uchl1
Enriched markers
✔
Canx
Negative markers
✔
NTA
Particle analysis
Identified molecule
Protein
Identification method
Mass spectrometry
PubMed ID
36408942
Organism
Rattus norvegicus
Experiment description
Quantitative proteomic analysis of exosomes from umbilical cord mesenchymal stem cells and rat bone marrow stem cells
Authors
"Xu X, Yin F, Guo M, Gan G, Lin G, Wen C, Wang J, Song P, Wang J, Qi ZQ, Zhong CQ."
Journal name
Proteomics
Publication year
2023
Sample
Bone marrow mesenchymal stem cells
Sample name
BMSC - Passage 7
Isolation/purification methods
Differential centrifugation Filtration Ultracentrifugation
Flotation density
-
Molecules identified in the study
Protein
Methods used in the study
Western blotting Mass spectometry
3
Experiment ID
491
MISEV standards
✔
EM
Biophysical techniques
✔
Cd9|Cd81|Cd63|Gapdh|Sdcbp|Lamp1|Aqp1|Rab5a|Icam1|Cd82|Itga2b|Tsg101|Lamp2|Rab35|Flot1|Flot2|Cd151|Rab5b|Tfrc|Uchl1
Enriched markers
✔
Canx
Negative markers
✔
NTA
Particle analysis
Identified molecule
Protein
Identification method
Mass spectrometry
PubMed ID
36408942
Organism
Rattus norvegicus
Experiment description
Quantitative proteomic analysis of exosomes from umbilical cord mesenchymal stem cells and rat bone marrow stem cells
Authors
"Xu X, Yin F, Guo M, Gan G, Lin G, Wen C, Wang J, Song P, Wang J, Qi ZQ, Zhong CQ."
Journal name
Proteomics
Publication year
2023
Sample
Bone marrow mesenchymal stem cells
Sample name
BMSC - Passage 8
Isolation/purification methods
Differential centrifugation Filtration Ultracentrifugation
Flotation density
-
Molecules identified in the study
Protein
Methods used in the study
Western blotting Mass spectometry
4
Experiment ID
492
MISEV standards
✔
EM
Biophysical techniques
✔
Cd9|Cd81|Cd63|Gapdh|Sdcbp|Lamp1|Aqp1|Rab5a|Icam1|Cd82|Itga2b|Tsg101|Lamp2|Rab35|Flot1|Flot2|Cd151|Rab5b|Tfrc|Uchl1
Enriched markers
✔
Canx
Negative markers
✔
NTA
Particle analysis
Identified molecule
Protein
Identification method
Mass spectrometry
PubMed ID
36408942
Organism
Rattus norvegicus
Experiment description
Quantitative proteomic analysis of exosomes from umbilical cord mesenchymal stem cells and rat bone marrow stem cells
Authors
"Xu X, Yin F, Guo M, Gan G, Lin G, Wen C, Wang J, Song P, Wang J, Qi ZQ, Zhong CQ."
Journal name
Proteomics
Publication year
2023
Sample
Bone marrow mesenchymal stem cells
Sample name
BMSC - Passage 9
Isolation/purification methods
Differential centrifugation Filtration Ultracentrifugation
Flotation density
-
Molecules identified in the study
Protein
Methods used in the study
Western blotting Mass spectometry
5
Experiment ID
207
MISEV standards
✔
EM
Biophysical techniques
✔
TSG101|HSP70|FLOT1
Enriched markers
✔
VDAC
Negative markers
✔
NTA
Particle analysis
Identified molecule
protein
Identification method
Mass spectrometry
PubMed ID
23161513
Organism
Homo sapiens
Experiment description
Proteomic analysis of exosomes from mutant KRAS colon cancer cells identifies intercellular transfer of mutant KRAS.
Authors
"Demory Beckler M, Higginbotham JN, Franklin JL, Ham AJ, Halvey PJ, Imasuen IE, Whitwell C, Li M, Liebler DC, Coffey RJ."
Journal name
Mol Cell Proteomics
Publication year
2012
Sample
Colorectal cancer cells
Sample name
DKO-1
Isolation/purification methods
Differential centrifugation Filtration
Flotation density
-
Molecules identified in the study
Protein
Methods used in the study
Mass spectrometry
6
Experiment ID
208
MISEV standards
✔
EM
Biophysical techniques
✔
TSG101|HSP70|FLOT1
Enriched markers
✔
VDAC
Negative markers
✔
NTA
Particle analysis
Identified molecule
protein
Identification method
Mass spectrometry
PubMed ID
23161513
Organism
Homo sapiens
Experiment description
Proteomic analysis of exosomes from mutant KRAS colon cancer cells identifies intercellular transfer of mutant KRAS.
Authors
"Demory Beckler M, Higginbotham JN, Franklin JL, Ham AJ, Halvey PJ, Imasuen IE, Whitwell C, Li M, Liebler DC, Coffey RJ."
Journal name
Mol Cell Proteomics
Publication year
2012
Sample
Colorectal cancer cells
Sample name
Dks-8
Isolation/purification methods
Differential centrifugation Filtration
Flotation density
-
Molecules identified in the study
Protein
Methods used in the study
Mass spectrometry
7
Experiment ID
209
MISEV standards
✘
Biophysical techniques
✔
TSG101|HSP70|FLOT1
Enriched markers
✔
VDAC
Negative markers
✔
NTA
Particle analysis
Identified molecule
protein
Identification method
Mass spectrometry
PubMed ID
23161513
Organism
Homo sapiens
Experiment description
Proteomic analysis of exosomes from mutant KRAS colon cancer cells identifies intercellular transfer of mutant KRAS.
Authors
"Demory Beckler M, Higginbotham JN, Franklin JL, Ham AJ, Halvey PJ, Imasuen IE, Whitwell C, Li M, Liebler DC, Coffey RJ."
Journal name
Mol Cell Proteomics
Publication year
2012
Sample
Colorectal cancer cells
Sample name
DLD-1
Isolation/purification methods
Differential centrifugation Filtration
Flotation density
-
Molecules identified in the study
Protein
Methods used in the study
Mass spectrometry
8
Experiment ID
200
MISEV standards
✔
EM
Biophysical techniques
✔
HSP70|HSP90|TSG101|Alix|GAPDH
Enriched markers
✘
Negative markers
✔
NTA
Particle analysis
Identified molecule
protein
Identification method
Mass spectrometry
PubMed ID
22635005
Organism
Homo sapiens
Experiment description
Melanoma exosomes educate bone marrow progenitor cells toward a pro-metastatic phenotype through MET.
Authors
"Peinado H, Aleckovic M, Lavotshkin S, Matei I, Costa-Silva B, Moreno-Bueno G, Hergueta-Redondo M, Williams C, Garcia-Santos G, Ghajar C, Nitadori-Hoshino A, Hoffman C, Badal K, Garcia BA, Callahan MK, Yuan J, Martins VR, Skog J, Kaplan RN, Brady MS, Wolchok JD, Chapman PB, Kang Y, Bromberg J, Lyden D."
Journal name
Nat Med
Publication year
2012
Sample
Melanoma cells
Sample name
B16-F10 SK-MEL-202 SK-MEL035 SK-MEL-265
Isolation/purification methods
Differential centrifugation Filtration Sucrose cushion
Flotation density
-
Molecules identified in the study
Protein
Methods used in the study
Mass spectrometry
9
Experiment ID
834
MISEV standards
✔
EM
Biophysical techniques
✔
LAMP2|CD63|FLOT1|ITGA2B|ICAM1|CD9|CD151|TFRC|RAB5A|GAPDH|AQP1|TSG101
Enriched markers
✔
CANX
Negative markers
✔
NTA
Particle analysis
Identified molecule
Protein
Identification method
Mass spectrometry
PubMed ID
35333565
Organism
Homo sapiens
Experiment description
LAMP2A regulates the loading of proteins into exosomes
Authors
"Ferreira JV, da Rosa Soares A, Ramalho J, Máximo Carvalho C, Cardoso MH, Pintado P, Carvalho AS, Beck HC, Matthiesen R, Zuzarte M, Girão H, van Niel G, Pereira P"
Journal name
Sci Adv
Publication year
2022
Sample
Retinal pigment epithelial cells
Sample name
ARPE-19
Isolation/purification methods
Differential centrifugation Filtration Ultracentrifugation
Flotation density
-
Molecules identified in the study
Protein
Methods used in the study
Western blotting Mass spectrometry
10
Experiment ID
835
MISEV standards
✔
EM
Biophysical techniques
✔
CD63|FLOT1|ITGA2B|ICAM1|CD9|CD151|TFRC|RAB5A|GAPDH|AQP1|TSG101
Enriched markers
✔
CANX
Negative markers
✔
NTA
Particle analysis
Identified molecule
Protein
Identification method
Mass spectrometry
PubMed ID
35333565
Organism
Homo sapiens
Experiment description
LAMP2A regulates the loading of proteins into exosomes
Authors
"Ferreira JV, da Rosa Soares A, Ramalho J, Máximo Carvalho C, Cardoso MH, Pintado P, Carvalho AS, Beck HC, Matthiesen R, Zuzarte M, Girão H, van Niel G, Pereira P"
Journal name
Sci Adv
Publication year
2022
Sample
Retinal pigment epithelial cells
Sample name
ARPE-19
Isolation/purification methods
Differential centrifugation Filtration Ultracentrifugation
Flotation density
-
Molecules identified in the study
Protein
Methods used in the study
Western blotting Mass spectrometry
Protein-protein interactions for TAX1BP1
Protein Interactor
ExoCarta ID
Identification method
PubMed
Species
1
GABARAPL1
23710
Two-hybrid
Homo sapiens
Two-hybrid
Homo sapiens
2
FAM58A
Affinity Capture-MS
Homo sapiens
3
TNFAIP3
7128
Two-hybrid
Homo sapiens
Affinity Capture-Western
Homo sapiens
Affinity Capture-Western
Homo sapiens
Affinity Capture-MS
Homo sapiens
Affinity Capture-MS
Homo sapiens
Affinity Capture-Western
Homo sapiens
Affinity Capture-Western
Homo sapiens
Two-hybrid
Homo sapiens
4
MAP1LC3C
Reconstituted Complex
Homo sapiens
Two-hybrid
Homo sapiens
Two-hybrid
Homo sapiens
5
FHL5
9457
Affinity Capture-MS
Homo sapiens
Affinity Capture-MS
Homo sapiens
Affinity Capture-MS
Homo sapiens
6
TNIP1
10318
Affinity Capture-Western
Homo sapiens
Affinity Capture-Western
Homo sapiens
Two-hybrid
Homo sapiens
Two-hybrid
Homo sapiens
7
DNAJC11
55735
Affinity Capture-MS
Homo sapiens
8
UBE2A
Affinity Capture-MS
Homo sapiens
9
NRSN1
Affinity Capture-MS
Homo sapiens
10
SCNM1
Two-hybrid
Homo sapiens
11
BTF3
689
Affinity Capture-MS
Homo sapiens
12
TSG101
7251
Two-hybrid
Homo sapiens
13
SPSB4
Affinity Capture-MS
Homo sapiens
14
HSD17B3
Affinity Capture-MS
Homo sapiens
15
FAM189B
Affinity Capture-MS
Homo sapiens
16
UBC
7316
Reconstituted Complex
Homo sapiens
Reconstituted Complex
Homo sapiens
Protein-peptide
Homo sapiens
Co-crystal Structure
Homo sapiens
Reconstituted Complex
Homo sapiens
Two-hybrid
Homo sapiens
17
LRRC73
Affinity Capture-MS
Homo sapiens
18
RIPK1
8737
Affinity Capture-Western
Homo sapiens
Affinity Capture-Western
Homo sapiens
19
KDELR1
10945
Affinity Capture-MS
Homo sapiens
Affinity Capture-MS
Homo sapiens
20
RB1CC1
9821
Reconstituted Complex
Homo sapiens
Affinity Capture-Western
Homo sapiens
Affinity Capture-MS
Homo sapiens
21
APEX1
328
Affinity Capture-RNA
Homo sapiens
22
MAP1LC3B
81631
Reconstituted Complex
Homo sapiens
Two-hybrid
Homo sapiens
23
EMILIN1
11117
Affinity Capture-MS
Homo sapiens
Affinity Capture-MS
Homo sapiens
Two-hybrid
Homo sapiens
Two-hybrid
Homo sapiens
24
C18orf25
147339
Two-hybrid
Homo sapiens
25
KIF5B
3799
Two-hybrid
Homo sapiens
26
SLC5A12
159963
Affinity Capture-MS
Homo sapiens
27
ORC5
Two-hybrid
Homo sapiens
28
CALCOCO2
Affinity Capture-Western
Homo sapiens
Two-hybrid
Homo sapiens
29
Cenpe
Affinity Capture-MS
Mus musculus
30
OTUD7B
56957
Affinity Capture-Western
Homo sapiens
31
IKBKE
9641
Affinity Capture-Western
Homo sapiens
32
TBC1D15
64786
Two-hybrid
Homo sapiens
33
IGFN1
Two-hybrid
Homo sapiens
34
LDLRAD4
Affinity Capture-MS
Homo sapiens
Affinity Capture-MS
Homo sapiens
Affinity Capture-MS
Homo sapiens
35
MAVS
57506
Affinity Capture-Western
Homo sapiens
36
RNF126
Affinity Capture-MS
Homo sapiens
Affinity Capture-MS
Homo sapiens
Affinity Capture-MS
Homo sapiens
37
TMEM136
Affinity Capture-MS
Homo sapiens
38
IQCF2
Affinity Capture-MS
Homo sapiens
39
GRIN3B
Affinity Capture-MS
Homo sapiens
40
RNF11
26994
Affinity Capture-Western
Homo sapiens
Two-hybrid
Homo sapiens
41
MED4
29079
Affinity Capture-MS
Homo sapiens
42
TBC1D17
79735
Two-hybrid
Homo sapiens
43
RABGEF1
27342
Affinity Capture-MS
Homo sapiens
Affinity Capture-MS
Homo sapiens
44
CXXC1
Two-hybrid
Homo sapiens
Two-hybrid
Homo sapiens
45
TOLLIP
54472
Proximity Label-MS
Homo sapiens
46
RNF6
Affinity Capture-MS
Homo sapiens
47
MIB1
57534
Proximity Label-MS
Homo sapiens
48
REEP4
Affinity Capture-MS
Homo sapiens
Affinity Capture-MS
Homo sapiens
Affinity Capture-MS
Homo sapiens
49
TCEA2
Two-hybrid
Homo sapiens
50
OPTN
10133
Affinity Capture-Western
Homo sapiens
Affinity Capture-Western
Homo sapiens
51
NBN
4683
Co-fractionation
Homo sapiens
52
RNF115
Affinity Capture-MS
Homo sapiens
Affinity Capture-MS
Homo sapiens
53
SSX2
Two-hybrid
Homo sapiens
54
Spred2
Affinity Capture-MS
Mus musculus
55
DAZAP2
Two-hybrid
Homo sapiens
Two-hybrid
Homo sapiens
56
PLEKHB2
55041
Two-hybrid
Homo sapiens
57
TNIP3
Two-hybrid
Homo sapiens
58
GABARAP
11337
Reconstituted Complex
Homo sapiens
59
NTRK1
4914
Affinity Capture-MS
Homo sapiens
60
RAD18
Two-hybrid
Homo sapiens
61
FOXC2
Two-hybrid
Homo sapiens
62
SLC22A23
Affinity Capture-MS
Homo sapiens
Affinity Capture-MS
Homo sapiens
63
WDYHV1
Two-hybrid
Homo sapiens
64
DYNLL2
140735
Affinity Capture-MS
Homo sapiens
65
MRPL11
65003
Two-hybrid
Homo sapiens
Two-hybrid
Homo sapiens
66
RAD54L2
Two-hybrid
Homo sapiens
67
ITCH
83737
Affinity Capture-Western
Homo sapiens
Affinity Capture-Western
Homo sapiens
68
GET4
51608
Affinity Capture-MS
Homo sapiens
69
HSPB8
26353
Co-localization
Homo sapiens
70
DAXX
Two-hybrid
Homo sapiens
71
VCP
7415
Affinity Capture-MS
Homo sapiens
72
HNRNPD
3184
Affinity Capture-MS
Homo sapiens
73
CUL3
8452
Affinity Capture-MS
Homo sapiens
74
CTNNB1
1499
Affinity Capture-MS
Homo sapiens
75
TRAF6
7189
Two-hybrid
Homo sapiens
Affinity Capture-Western
Homo sapiens
Affinity Capture-Western
Homo sapiens
Two-hybrid
Homo sapiens
76
TCL1A
Two-hybrid
Homo sapiens
77
FAM168A
Two-hybrid
Homo sapiens
78
FAM90A1
Two-hybrid
Homo sapiens
79
TRAF3
7187
Affinity Capture-Western
Homo sapiens
80
FAM84B
157638
Two-hybrid
Homo sapiens
81
CCDC85A
Affinity Capture-MS
Homo sapiens
82
MYO6
4646
Two-hybrid
Homo sapiens
Reconstituted Complex
Homo sapiens
Affinity Capture-Western
Homo sapiens
Two-hybrid
Homo sapiens
Reconstituted Complex
Homo sapiens
Reconstituted Complex
Homo sapiens
Co-crystal Structure
Homo sapiens
83
UBASH3A
53347
Two-hybrid
Homo sapiens
84
DLST
1743
Affinity Capture-MS
Homo sapiens
85
PPAPDC1A
Affinity Capture-MS
Homo sapiens
86
KAT5
Two-hybrid
Homo sapiens
87
DSTN
11034
Two-hybrid
Homo sapiens
Two-hybrid
Homo sapiens
88
LGALS8
3964
Two-hybrid
Homo sapiens
Affinity Capture-MS
Homo sapiens
Affinity Capture-MS
Homo sapiens
Reconstituted Complex
Homo sapiens
Two-hybrid
Homo sapiens
Affinity Capture-MS
Homo sapiens
Two-hybrid
Homo sapiens
89
RNF26
Affinity Capture-MS
Homo sapiens
Affinity Capture-Western
Homo sapiens
Co-localization
Homo sapiens
90
AR
367
Affinity Capture-MS
Homo sapiens
91
RAB18
22931
Two-hybrid
Homo sapiens
92
STARD13
90627
Two-hybrid
Homo sapiens
Affinity Capture-Western
Homo sapiens
93
TSHZ3
Two-hybrid
Homo sapiens
94
AGO1
Affinity Capture-RNA
Homo sapiens
95
RFWD2
Affinity Capture-MS
Homo sapiens
Affinity Capture-MS
Homo sapiens
96
POLR1C
9533
Two-hybrid
Homo sapiens
97
MRPL53
Two-hybrid
Homo sapiens
98
TRIM45
Two-hybrid
Homo sapiens
99
IKBKG
8517
Two-hybrid
Homo sapiens
100
GABARAPL2
11345
Two-hybrid
Homo sapiens
101
LITAF
9516
Two-hybrid
Homo sapiens
102
UBA52
7311
Two-hybrid
Homo sapiens
103
SQSTM1
8878
Proximity Label-MS
Homo sapiens
104
TSEN2
Two-hybrid
Homo sapiens
105
CWF19L2
Two-hybrid
Homo sapiens
106
OR2G6
Affinity Capture-MS
Homo sapiens
107
OR5M3
Affinity Capture-MS
Homo sapiens
108
ALG6
Affinity Capture-MS
Homo sapiens
109
TBK1
29110
Affinity Capture-Western
Homo sapiens
110
UBB
7314
Two-hybrid
Homo sapiens
111
NMRK1
Two-hybrid
Homo sapiens
Two-hybrid
Homo sapiens
112
GABRR1
Affinity Capture-MS
Homo sapiens
Affinity Capture-Western
Homo sapiens
113
UBTFL1
Two-hybrid
Homo sapiens
114
FAM161A
Two-hybrid
Homo sapiens
115
CBX8
57332
Two-hybrid
Homo sapiens
116
TCAF1
9747
Two-hybrid
Homo sapiens
117
KANK2
25959
Two-hybrid
Homo sapiens
118
KXD1
79036
Affinity Capture-MS
Homo sapiens
119
FAM189A2
Two-hybrid
Homo sapiens
120
TMEM31
Affinity Capture-MS
Homo sapiens
121
RAD23B
5887
Two-hybrid
Homo sapiens
122
COG7
91949
Two-hybrid
Homo sapiens
Two-hybrid
Homo sapiens
123
LMO3
Two-hybrid
Homo sapiens
124
PLEKHN1
Two-hybrid
Homo sapiens
Two-hybrid
Homo sapiens
View the network
image/svg+xml
Pathways in which TAX1BP1 is involved