Gene description for RNF11
Gene name
ring finger protein 11
Gene symbol
RNF11
Other names/aliases
CGI-123 SID1669
Species
Homo sapiens
Database cross references - RNF11
ExoCarta
ExoCarta_26994
Entrez Gene
26994
HGNC
10056
MIM
612598
UniProt
Q9Y3C5
RNF11 identified in exosomes derived from the following tissue/cell type
Platelets
25332113
Platelets
25332113
Platelets
25332113
Urine
15326289
Urine
19056867
Gene ontology annotations for RNF11
Experiment description of studies that identified RNF11 in exosomes
1
Experiment ID
231
ISEV standards
✘
EV Biophysical techniques
✔
Alix
EV Cytosolic markers
✔
CD63|CD9
EV Membrane markers
✘
EV Negative markers
✔
NTA
EV Particle analysis
Identified molecule
protein
Identification method
Mass spectrometry
PubMed ID
25332113
Organism
Homo sapiens
Experiment description
Lipidomic and proteomic characterization of platelet extracellular vesicle subfractions from senescent platelets
Authors
Pienimaeki-Roemer A, Kuhlmann K, Bottcher A, Konovalova T, Black A, Orso E, Liebisch G, Ahrens M, Eisenacher M, Meyer HE, Schmitz G.
Journal name
Transfusion
Publication year
2015
Sample
Platelets
Sample name
PL-Exs - Rep 1
Isolation/purification methods
Differential centrifugation Filtration Ultracentrifugation Optiprep density gradient
Flotation density
1.12-1.15 g/mL
Molecules identified in the study
Protein Lipids
Methods used in the study
Western blotting Mass spectrometry
2
Experiment ID
232
ISEV standards
✘
EV Biophysical techniques
✘
EV Cytosolic markers
✘
EV Membrane markers
✘
EV Negative markers
✘
EV Particle analysis
Identified molecule
protein
Identification method
Mass spectrometry
PubMed ID
25332113
Organism
Homo sapiens
Experiment description
Lipidomic and proteomic characterization of platelet extracellular vesicle subfractions from senescent platelets
Authors
Pienimaeki-Roemer A, Kuhlmann K, Bottcher A, Konovalova T, Black A, Orso E, Liebisch G, Ahrens M, Eisenacher M, Meyer HE, Schmitz G.
Journal name
Transfusion
Publication year
2015
Sample
Platelets
Sample name
PL-Exs - Rep 2
Isolation/purification methods
Differential centrifugation Filtration Ultracentrifugation Optiprep density gradient
Flotation density
1.12-1.15 g/mL
Molecules identified in the study
Protein
Methods used in the study
Mass spectrometry
3
Experiment ID
233
ISEV standards
✘
EV Biophysical techniques
✘
EV Cytosolic markers
✘
EV Membrane markers
✘
EV Negative markers
✘
EV Particle analysis
Identified molecule
protein
Identification method
Mass spectrometry
PubMed ID
25332113
Organism
Homo sapiens
Experiment description
Lipidomic and proteomic characterization of platelet extracellular vesicle subfractions from senescent platelets
Authors
Pienimaeki-Roemer A, Kuhlmann K, Bottcher A, Konovalova T, Black A, Orso E, Liebisch G, Ahrens M, Eisenacher M, Meyer HE, Schmitz G.
Journal name
Transfusion
Publication year
2015
Sample
Platelets
Sample name
PL-Exs - Rep 3
Isolation/purification methods
Differential centrifugation Filtration Ultracentrifugation Optiprep density gradient
Flotation density
1.12-1.15 g/mL
Molecules identified in the study
Protein
Methods used in the study
Mass spectrometry
4
Experiment ID
13
ISEV standards
✔
IEM
EV Biophysical techniques
✔
Alix|RAB4|RAB5B|RAB11|TSG101
EV Cytosolic markers
✔
CD9|AQP2|AQP1
EV Membrane markers
✘
EV Negative markers
✘
EV Particle analysis
Identified molecule
protein
Identification method
Mass spectrometry
PubMed ID
15326289
Organism
Homo sapiens
Experiment description
Identification and proteomic profiling of exosomes in human urine.
Authors
Pisitkun T, Shen RF, Knepper MA
Journal name
PNAS
Publication year
2004
Sample
Urine
Sample name
Urine - Normal
Isolation/purification methods
Ultracentrifugation
Flotation density
-
Molecules identified in the study
Protein
Methods used in the study
Mass spectrometry [LCQ DECA XP] Western blotting
5
Experiment ID
63
ISEV standards
✘
EV Biophysical techniques
✘
EV Cytosolic markers
✔
AQP2
EV Membrane markers
✘
EV Negative markers
✘
EV Particle analysis
Identified molecule
protein
Identification method
Mass spectrometry
PubMed ID
19056867
Organism
Homo sapiens
Experiment description
Large-scale proteomics and phosphoproteomics of urinary exosomes.
Authors
Gonzales PA, Pisitkun T, Hoffert JD, Tchapyjnikov D, Star RA, Kleta R, Wang NS, Knepper MA
Journal name
JASN
Publication year
2009
Sample
Urine
Sample name
Urine - Normal
Isolation/purification methods
Differential centrifugation
Flotation density
-
Molecules identified in the study
Protein
Methods used in the study
Mass spectrometry [LTQ] Western blotting
Protein-protein interactions for RNF11
Protein Interactor
ExoCarta ID
Identification method
PubMed
Species
1
RPS27A
6233
Affinity Capture-MS
Homo sapiens
Two-hybrid
Homo sapiens
2
TNIP1
10318
Affinity Capture-MS
Homo sapiens
3
UBQLN4
56893
Affinity Capture-MS
Homo sapiens
4
ZFYVE9
Affinity Capture-MS
Homo sapiens
5
QARS
5859
Affinity Capture-MS
Homo sapiens
6
NDP52
Affinity Capture-MS
Homo sapiens
7
WWP1
11059
Affinity Capture-MS
Homo sapiens
8
RP42
Affinity Capture-MS
Homo sapiens
9
PDCD6IP
10015
Affinity Capture-MS
Homo sapiens
10
USP5
8078
Affinity Capture-MS
Homo sapiens
11
STAM2
10254
Affinity Capture-MS
Homo sapiens
12
IKBKG
8517
Affinity Capture-MS
Homo sapiens
13
EPS15
2060
Two-hybrid
Homo sapiens
14
UBC
7316
Affinity Capture-MS
Homo sapiens
Two-hybrid
Homo sapiens
15
ZFYVE16
Affinity Capture-MS
Homo sapiens
16
WWP2
11060
Affinity Capture-MS
Homo sapiens
17
UBE2D4
Affinity Capture-MS
Homo sapiens
18
CBLB
Affinity Capture-MS
Homo sapiens
19
OPTN
10133
Affinity Capture-MS
Homo sapiens
20
ZNF350
Two-hybrid
Homo sapiens
21
CCDC127
Affinity Capture-MS
Homo sapiens
22
UBB
7314
Affinity Capture-MS
Homo sapiens
23
RABGEF1
Affinity Capture-MS
Homo sapiens
24
EPN3
55040
Affinity Capture-MS
Homo sapiens
25
AMSH-LP
Two-hybrid
Homo sapiens
26
DKFZP547N043
Affinity Capture-MS
Homo sapiens
27
STAMBP
10617
Two-hybrid
Homo sapiens
Reconstituted Complex
Homo sapiens
Affinity Capture-Western
Homo sapiens
28
NEDD4L
23327
Affinity Capture-MS
Homo sapiens
29
POLI
Affinity Capture-MS
Homo sapiens
View the network
image/svg+xml
Pathways in which RNF11 is involved
No pathways found