Gene description for UBE2L3
Gene name ubiquitin-conjugating enzyme E2L 3
Gene symbol UBE2L3
Other names/aliases E2-F1
L-UBC
UBCH7
UbcM4
Species Homo sapiens
 Database cross references - UBE2L3
ExoCarta ExoCarta_7332
Entrez Gene 7332
HGNC 12488
MIM 603721
UniProt P68036  
 UBE2L3 identified in exosomes derived from the following tissue/cell type
Melanoma cells 25950383    
Melanoma cells 25950383    
Melanoma cells 25950383    
Prostate cancer cells 25844599    
Squamous carcinoma cells 20124223    
 Gene ontology annotations for UBE2L3
Molecular Function
    protein binding GO:0005515 IPI
    ubiquitin-protein transferase activity GO:0004842 TAS
    ligase activity GO:0016874 IEA
    enzyme binding GO:0019899 TAS
    ubiquitin conjugating enzyme activity GO:0061631 IDA
    ATP binding GO:0005524 IEA
    poly(A) RNA binding GO:0044822 IDA
    ubiquitin-protein transferase activator activity GO:0097027 IGI
    ubiquitin protein ligase binding GO:0031625 IPI
    transcription coactivator activity GO:0003713 IDA
Biological Process
    transcription, DNA-templated GO:0006351 IEA
    positive regulation of ubiquitin-protein transferase activity GO:0051443 IGI
    cell proliferation GO:0008283 IMP
    cellular response to steroid hormone stimulus GO:0071383 IMP
    protein ubiquitination GO:0016567 IDA
    positive regulation of protein targeting to mitochondrion GO:1903955 IMP
    cell cycle phase transition GO:0044770 IMP
    cellular response to glucocorticoid stimulus GO:0071385 IDA
    ubiquitin-dependent protein catabolic process GO:0006511 TAS
    protein polyubiquitination GO:0000209 IDA
    cellular protein modification process GO:0006464 TAS
    regulation of transcription, DNA-templated GO:0006355 IMP
    positive regulation of protein ubiquitination GO:0031398 IGI
    protein K11-linked ubiquitination GO:0070979 IDA
Subcellular Localization
    nucleus GO:0005634 IDA
    ubiquitin ligase complex GO:0000151 TAS
    cytoplasm GO:0005737 IDA
    extracellular exosome GO:0070062 IDA
 Experiment description of studies that identified UBE2L3 in exosomes
1
Experiment ID 254
ISEV standards
EM
EV Biophysical techniques
TSG101
EV Cytosolic markers
FLOT1|CD81
EV Membrane markers
EV Negative markers
NTA
EV Particle analysis
Identified molecule protein
Identification method Mass spectrometry
PubMed ID 25950383    
Organism Homo sapiens
Experiment description Proteome characterization of melanoma exosomes reveals a specific signature for metastatic cell lines
Authors Lazar I, Clement E, Ducoux-Petit M, Denat L, Soldan V, Dauvillier S, Balor S4, Burlet-Schiltz O1, Larue L, Muller C Nieto L
Journal name Pigment Cell Melanoma Res
Publication year 2015
Sample Melanoma cells
Sample name MNT-1
Isolation/purification methods Differential centrifugation
Unltracentrifugation
Sucrose density gradient
Flotation density 1.13 - 1.19 g/mL
Molecules identified in the study Protein
Methods used in the study Western blotting
Mass spectrometry
2
Experiment ID 255
ISEV standards
EM
EV Biophysical techniques
TSG101
EV Cytosolic markers
FLOT1
EV Membrane markers
EV Negative markers
NTA
EV Particle analysis
Identified molecule protein
Identification method Mass spectrometry
PubMed ID 25950383    
Organism Homo sapiens
Experiment description Proteome characterization of melanoma exosomes reveals a specific signature for metastatic cell lines
Authors Lazar I, Clement E, Ducoux-Petit M, Denat L, Soldan V, Dauvillier S, Balor S4, Burlet-Schiltz O1, Larue L, Muller C Nieto L
Journal name Pigment Cell Melanoma Res
Publication year 2015
Sample Melanoma cells
Sample name G1
Isolation/purification methods Differential centrifugation
Unltracentrifugation
Sucrose density gradient
Flotation density 1.13 - 1.19 g/mL
Molecules identified in the study Protein
Methods used in the study Western blotting
Mass spectrometry
3
Experiment ID 256
ISEV standards
EM
EV Biophysical techniques
TSG101
EV Cytosolic markers
FLOT1
EV Membrane markers
EV Negative markers
NTA
EV Particle analysis
Identified molecule protein
Identification method Mass spectrometry
PubMed ID 25950383    
Organism Homo sapiens
Experiment description Proteome characterization of melanoma exosomes reveals a specific signature for metastatic cell lines
Authors Lazar I, Clement E, Ducoux-Petit M, Denat L, Soldan V, Dauvillier S, Balor S4, Burlet-Schiltz O1, Larue L, Muller C Nieto L
Journal name Pigment Cell Melanoma Res
Publication year 2015
Sample Melanoma cells
Sample name 501mel
Isolation/purification methods Differential centrifugation
Unltracentrifugation
Sucrose density gradient
Flotation density 1.13 - 1.19 g/mL
Molecules identified in the study Protein
Methods used in the study Western blotting
Mass spectrometry
4
Experiment ID 275
ISEV standards
EM
EV Biophysical techniques
TSG101|Alix|RAB5A
EV Cytosolic markers
CD9|CD82|CD63|CD81
EV Membrane markers
AIF
EV Negative markers
NTA
EV Particle analysis
Identified molecule protein
Identification method Mass spectrometry
PubMed ID 25844599    
Organism Homo sapiens
Experiment description Molecular profiling of prostate cancer derived exosomes may reveal a predictive signature for response to docetaxel.
Authors Kharaziha P, Chioureas D, Rutishauser D, Baltatzis G, Lennartsson L, Fonseca P, Azimi A, Hultenby K, Zubarev R, Ullen A, Yachnin J, Nilsson S, Panaretakis T.
Journal name Oncotarget
Publication year 2015
Sample Prostate cancer cells
Sample name DU145 - Docetaxel sensitive
Isolation/purification methods Filtration
Ultracentrifugation
Sucrose density gradient
Flotation density 1.12-1.19 g/mL
Molecules identified in the study Protein
Methods used in the study Mass spectrometry/Flow cytometry/Western blotting
5
Experiment ID 191
ISEV standards
EV Biophysical techniques
Alix
EV Cytosolic markers
CD81|CD9
EV Membrane markers
EV Negative markers
EV Particle analysis
Identified molecule protein
Identification method Mass spectrometry
PubMed ID 20124223    
Organism Homo sapiens
Experiment description Hypoxic tumor cell modulates its microenvironment to enhance angiogenic and metastatic potential by secretion of proteins and exosomes.
Authors Park JE, Tan HS, Datta A, Lai RC, Zhang H, Meng W, Lim SK, Sze SK.
Journal name Mol Cell Proteomics
Publication year 2010
Sample Squamous carcinoma cells
Sample name Squamous carcinoma cell (A431)
Isolation/purification methods Differential centrifugation
Flotation density -
Molecules identified in the study Protein
Methods used in the study Mass spectrometry
 Protein-protein interactions for UBE2L3
  Protein Interactor ExoCarta ID Identification method PubMed Species
1 ARIH1  
Two-hybrid Homo sapiens
Reconstituted Complex Homo sapiens
Affinity Capture-Western Homo sapiens
Two-hybrid Homo sapiens
2 CBL 867
Reconstituted Complex Homo sapiens
Co-crystal Structure Homo sapiens
3 RNF19  
Invivo Homo sapiens
4 TRIAD3  
Affinity Capture-Western Homo sapiens
5 ARIH2  
Two-hybrid Homo sapiens
6 BRCA1 672
Reconstituted Complex Homo sapiens
7 PARK2  
Invivo Homo sapiens
8 PARC  
Two-hybrid Homo sapiens
9 UBE3A 7337
Invivo Homo sapiens
Invitro Homo sapiens
Two-hybrid Homo sapiens
Biochemical Activity Homo sapiens
Biochemical Activity Homo sapiens
10 NEDD4 4734
Biochemical Activity Homo sapiens
11 STK6  
Affinity Capture-MS Homo sapiens
12 PTEN  
Affinity Capture-Western Homo sapiens
13 RNF144  
Invivo Homo sapiens
Two-hybrid Homo sapiens
14 UBOX5  
Two-hybrid Homo sapiens
Reconstituted Complex Homo sapiens
15 Ubox5  
Two-hybrid Mus musculus
16 EIF4E2  
Affinity Capture-Western Homo sapiens
View the network image/svg+xml
 Pathways in which UBE2L3 is involved
PathwayEvidenceSource
Antigen processing: Ubiquitination & Proteasome degradation TAS Reactome





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