Gene description for PSMD10
Gene name proteasome (prosome, macropain) 26S subunit, non-ATPase, 10
Gene symbol PSMD10
Other names/aliases dJ889N15.2
p28
p28(GANK)
Species Homo sapiens
 Database cross references - PSMD10
ExoCarta ExoCarta_5716
Entrez Gene 5716
HGNC 9555
MIM 300880
UniProt O75832  
 PSMD10 identified in exosomes derived from the following tissue/cell type
Ovarian cancer cells 23333927    
Ovarian cancer cells 23333927    
Squamous carcinoma cells 20124223    
Thymus 23844026    
 Gene ontology annotations for PSMD10
Molecular Function
    protein binding GO:0005515 IPI
    transcription factor binding GO:0008134 IPI
Biological Process
    positive regulation of protein ubiquitination GO:0031398 IMP
    protein polyubiquitination GO:0000209 TAS
    small molecule metabolic process GO:0044281 TAS
    cellular nitrogen compound metabolic process GO:0034641 TAS
    negative regulation of MAPK cascade GO:0043409 IMP
    positive regulation of canonical Wnt signaling pathway GO:0090263 TAS
    gene expression GO:0010467 TAS
    regulation of ubiquitin-protein ligase activity involved in mitotic cell cycle GO:0051439 TAS
    positive regulation of cyclin-dependent protein serine/threonine kinase activity GO:0045737 IDA
    negative regulation of NF-kappaB transcription factor activity GO:0032088 IDA
    positive regulation of ubiquitin-protein ligase activity involved in regulation of mitotic cell cycle transition GO:0051437 TAS
    negative regulation of DNA damage response, signal transduction by p53 class mediator GO:0043518 IDA
    apoptotic process GO:0006915 TAS
    mitotic cell cycle GO:0000278 TAS
    negative regulation of ubiquitin-protein ligase activity involved in mitotic cell cycle GO:0051436 TAS
    regulation of cellular amino acid metabolic process GO:0006521 TAS
    stimulatory C-type lectin receptor signaling pathway GO:0002223 TAS
    negative regulation of canonical Wnt signaling pathway GO:0090090 TAS
    antigen processing and presentation of exogenous peptide antigen via MHC class I, TAP-dependent GO:0002479 TAS
    negative regulation of transcription from RNA polymerase II promoter GO:0000122 IDA
    cytoplasmic sequestering of NF-kappaB GO:0007253 IDA
    innate immune response GO:0045087 TAS
    antigen processing and presentation of exogenous peptide antigen via MHC class I GO:0042590 TAS
    regulation of apoptotic process GO:0042981 TAS
    anaphase-promoting complex-dependent proteasomal ubiquitin-dependent protein catabolic process GO:0031145 TAS
    negative regulation of release of cytochrome c from mitochondria GO:0090201 IMP
    programmed cell death GO:0012501 TAS
    positive regulation of proteasomal ubiquitin-dependent protein catabolic process GO:0032436 TAS
    negative regulation of apoptotic process GO:0043066 TAS
    DNA damage response, signal transduction by p53 class mediator resulting in cell cycle arrest GO:0006977 TAS
    proteasome regulatory particle assembly GO:0070682 IMP
    viral process GO:0016032 TAS
    antigen processing and presentation of peptide antigen via MHC class I GO:0002474 TAS
    G1/S transition of mitotic cell cycle GO:0000082 TAS
    positive regulation of cell growth GO:0030307 IDA
Subcellular Localization
    nucleus GO:0005634 IDA
    proteasome complex GO:0000502 IDA
    proteasome regulatory particle, base subcomplex GO:0008540 IDA
    cytosol GO:0005829 TAS
    cytoplasm GO:0005737 IDA
    intermediate filament cytoskeleton GO:0045111 IDA
    proteasome regulatory particle GO:0005838 TAS
    nucleoplasm GO:0005654 TAS
 Experiment description of studies that identified PSMD10 in exosomes
1
Experiment ID 211
ISEV standards
EM
EV Biophysical techniques
TSG101|Alix
EV Cytosolic markers
EpCAM|TFRC
EV Membrane markers
cytochrome c|GOLGA2
EV Negative markers
EV Particle analysis
Identified molecule protein
Identification method Mass spectrometry
PubMed ID 23333927    
Organism Homo sapiens
Experiment description Characterization and proteomic analysis of ovarian cancer-derived exosomes.
Authors Liang B, Peng P, Chen S, Li L, Zhang M, Cao D, Yang J, Li H, Gui T, Li X, Shen K.
Journal name J Proteomics
Publication year 2013
Sample Ovarian cancer cells
Sample name IGROV1
Isolation/purification methods Differential centrifugation
Ultracentrifugation
Sucrose density gradient
Flotation density 1.09-1.15 g/mL
Molecules identified in the study Protein
Methods used in the study Mass spectrometry
2
Experiment ID 212
ISEV standards
CEM
EV Biophysical techniques
TSG101|Alix
EV Cytosolic markers
EpCAM|TFRC
EV Membrane markers
Cytochrome C|GOLGA2
EV Negative markers
EV Particle analysis
Identified molecule protein
Identification method Mass spectrometry
PubMed ID 23333927    
Organism Homo sapiens
Experiment description Characterization and proteomic analysis of ovarian cancer-derived exosomes.
Authors Liang B, Peng P, Chen S, Li L, Zhang M, Cao D, Yang J, Li H, Gui T, Li X, Shen K.
Journal name J Proteomics
Publication year 2013
Sample Ovarian cancer cells
Sample name OVCAR-3
Isolation/purification methods Differential centrifugation
Ultracentrifugation
Sucrose density gradient
Flotation density 1.09-1.15 g/mL
Molecules identified in the study Protein
Methods used in the study Mass spectrometry
3
Experiment ID 191
ISEV standards
EV Biophysical techniques
Alix
EV Cytosolic markers
CD81|CD9
EV Membrane markers
EV Negative markers
EV Particle analysis
Identified molecule protein
Identification method Mass spectrometry
PubMed ID 20124223    
Organism Homo sapiens
Experiment description Hypoxic tumor cell modulates its microenvironment to enhance angiogenic and metastatic potential by secretion of proteins and exosomes.
Authors Park JE, Tan HS, Datta A, Lai RC, Zhang H, Meng W, Lim SK, Sze SK.
Journal name Mol Cell Proteomics
Publication year 2010
Sample Squamous carcinoma cells
Sample name Squamous carcinoma cell (A431)
Isolation/purification methods Differential centrifugation
Flotation density -
Molecules identified in the study Protein
Methods used in the study Mass spectrometry
4
Experiment ID 217
ISEV standards
EM
EV Biophysical techniques
TSG101
EV Cytosolic markers
CD81|CD9|CD63
EV Membrane markers
EV Negative markers
NTA
EV Particle analysis
Identified molecule protein
Identification method Mass spectrometry
PubMed ID 23844026    
Organism Homo sapiens
Experiment description Characterization of human thymic exosomes.
Authors Skogberg G, Gudmundsdottir J, van der Post S, Sandstrom K, Bruhn S, Benson M, Mincheva-Nilsson L, Baranov V, Telemo E, Ekwall O.
Journal name PLoS One
Publication year 2013
Sample Thymus
Sample name Normal-Thymus
Isolation/purification methods Differential centrifugation
Filtration
Ultracentrifugation
Flotation density -
Molecules identified in the study Protein
Methods used in the study Mass spectrometry
 Protein-protein interactions for PSMD10
  Protein Interactor ExoCarta ID Identification method PubMed Species
1 DOK2 9046
Affinity Capture-MS Homo sapiens
2 GRB2 2885
Invivo Homo sapiens
Invitro Homo sapiens
Affinity Capture-MS Homo sapiens
3 PSMC3 5702
Affinity Capture-MS Homo sapiens
4 PSMD6 9861
Affinity Capture-MS Homo sapiens
5 PSMD11 5717
Affinity Capture-MS Homo sapiens
6 HIST1H2BC 8347
Affinity Capture-MS Homo sapiens
7 PSMD4 5710
Affinity Capture-MS Homo sapiens
8 PAAF1  
Affinity Capture-MS Homo sapiens
9 PSMD7 5713
Affinity Capture-MS Homo sapiens
10 PSMC1 5700
Affinity Capture-MS Homo sapiens
11 PSMD2 5708
Affinity Capture-MS Homo sapiens
12 CDK4 1019
Invivo Homo sapiens
Affinity Capture-MS Homo sapiens
13 MAGEA4 4103
Affinity Capture-MS Homo sapiens
14 WDR71  
Affinity Capture-MS Homo sapiens
15 ELOVL1 64834
Affinity Capture-MS Homo sapiens
16 PSMC5 5705
Affinity Capture-MS Homo sapiens
17 PSMD12 5718
Affinity Capture-MS Homo sapiens
18 PSMC6 5706
Affinity Capture-MS Homo sapiens
19 PSMD1 5707
Affinity Capture-MS Homo sapiens
20 PSMC4 5704
Invivo Homo sapiens
Invitro Homo sapiens
Two-hybrid Homo sapiens
Two-hybrid Homo sapiens
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
Affinity Capture-MS Homo sapiens
21 PSMC2 5701
Affinity Capture-MS Homo sapiens
22 PSMD3 5709
Affinity Capture-MS Homo sapiens
View the network image/svg+xml
 Pathways in which PSMD10 is involved
PathwayEvidenceSource
Activation of NF-kappaB in B cells TAS Reactome
Antigen processing: Ubiquitination & Proteasome degradation TAS Reactome
APC/C:Cdc20 mediated degradation of Securin TAS Reactome
APC/C:Cdh1 mediated degradation of Cdc20 and other APC/C:Cdh1 targeted proteins in late mitosis/early G1 TAS Reactome
Asymmetric localization of PCP proteins TAS Reactome
AUF1 (hnRNP D0) destabilizes mRNA TAS Reactome
Autodegradation of Cdh1 by Cdh1:APC/C TAS Reactome
Autodegradation of the E3 ubiquitin ligase COP1 TAS Reactome
Cdc20:Phospho-APC/C mediated degradation of Cyclin A TAS Reactome
CDK-mediated phosphorylation and removal of Cdc6 TAS Reactome
CDK-mediated phosphorylation and removal of Cdc6 TAS Reactome
CDT1 association with the CDC6:ORC:origin complex TAS Reactome
CLEC7A (Dectin-1) signaling TAS Reactome
Cross-presentation of soluble exogenous antigens (endosomes) TAS Reactome
Dectin-1 mediated noncanonical NF-kB signaling TAS Reactome
degradation of AXIN TAS Reactome
Degradation of beta-catenin by the destruction complex TAS Reactome
degradation of DVL TAS Reactome
Degradation of GLI1 by the proteasome TAS Reactome
Degradation of GLI2 by the proteasome TAS Reactome
ER-Phagosome pathway TAS Reactome
GLI3 is processed to GLI3R by the proteasome TAS Reactome
Hedgehog 'on' state TAS Reactome
Hedgehog ligand biogenesis TAS Reactome
Hh mutants that don't undergo autocatalytic processing are degraded by ERAD TAS Reactome
Orc1 removal from chromatin TAS Reactome
Orc1 removal from chromatin TAS Reactome
Regulation of activated PAK-2p34 by proteasome mediated degradation TAS Reactome
Regulation of ornithine decarboxylase (ODC) TAS Reactome
SCF(Skp2)-mediated degradation of p27/p21 TAS Reactome
SCF(Skp2)-mediated degradation of p27/p21 TAS Reactome
SCF-beta-TrCP mediated degradation of Emi1 TAS Reactome
Separation of Sister Chromatids TAS Reactome
Ubiquitin Mediated Degradation of Phosphorylated Cdc25A TAS Reactome
Ubiquitin-dependent degradation of Cyclin D1 TAS Reactome
Vif-mediated degradation of APOBEC3G TAS Reactome
Vpu mediated degradation of CD4 TAS Reactome





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