Experiment description of studies that identified GPATCH4 in exosomes

1 Experiment ID 236 MISEV standards ✔ EM Biophysical techniques ✔ TSG101|Alix|HSC70|GAPDH Enriched markers ✔ HSP90B1 Negative markers ✔ qNano Particle analysis Identified molecule mRNA Identification method RNA Sequencing PubMed ID 26054723     Organism Homo sapiens Experiment description Hepatocellular carcinoma-derived exosomes promote motility of immortalized hepatocyte through transfer of oncogenic proteins and RNAs Authors He M, Qin H, Poon TC, Sze SC, Ding X, Co NN, Ngai SM, Chan TF, Wong N Journal name Carcinogenesis Publication year 2015 Sample Hepatocellular carcinoma cells Sample name MHCC97L Isolation/purification methods Differential centrifugation Filtration Ultracentrifugation Sucrose density gradient Flotation density 1.13-1.19 g/mL Molecules identified in the study Protein RNA Methods used in the study Western blotting Mass spectrometry RT-PCR RNA Sequencing

Protein-protein interactions for GPATCH4

Protein Interactor ExoCarta ID Identification method PubMed Species 1 GNL2 29889 Affinity Capture-MS Homo sapiens Affinity Capture-MS Homo sapiens 2 UBE2H 7328 Affinity Capture-MS Homo sapiens 3 NOP14 8602 Affinity Capture-MS Homo sapiens Affinity Capture-MS Homo sapiens 4 RPSAP58 388524 Affinity Capture-MS Homo sapiens 5 H1FNT   Affinity Capture-MS Homo sapiens 6 HIST2H2AB 317772 Affinity Capture-MS Homo sapiens 7 ZNF771   Affinity Capture-MS Homo sapiens 8 COIL   Proximity Label-MS Homo sapiens 9 PAXIP1   Affinity Capture-MS Homo sapiens 10 RPS3A 6189 Affinity Capture-MS Homo sapiens 11 KLF9 687 Proximity Label-MS Homo sapiens 12 TOP2B 7155 Affinity Capture-MS Homo sapiens 13 ZNF668   Affinity Capture-MS Homo sapiens Affinity Capture-MS Homo sapiens 14 ZCCHC9   Affinity Capture-MS Homo sapiens 15 PRPF38A 84950 Affinity Capture-MS Homo sapiens 16 RPL37A 6168 Affinity Capture-MS Homo sapiens 17 NOP56 10528 Proximity Label-MS Homo sapiens Affinity Capture-MS Homo sapiens 18 DHX8 1659 Proximity Label-MS Homo sapiens 19 RPL26L1 51121 Affinity Capture-MS Homo sapiens Affinity Capture-MS Homo sapiens 20 RPL10 6134 Affinity Capture-MS Homo sapiens 21 RPL15 6138 Affinity Capture-MS Homo sapiens Affinity Capture-MS Homo sapiens 22 BRD2   Affinity Capture-MS Homo sapiens 23 RPL14 9045 Affinity Capture-MS Homo sapiens 24 BUD13   Affinity Capture-MS Homo sapiens 25 ZNF92   Affinity Capture-MS Homo sapiens Affinity Capture-MS Homo sapiens 26 RBM34   Affinity Capture-MS Homo sapiens 27 PWP2 5822 Affinity Capture-MS Homo sapiens Affinity Capture-MS Homo sapiens 28 CENPA   Proximity Label-MS Homo sapiens 29 APEX1 328 Affinity Capture-RNA Homo sapiens Proximity Label-MS Homo sapiens 30 DDX23 9416 Proximity Label-MS Homo sapiens 31 RPL10A 4736 Affinity Capture-MS Homo sapiens 32 MYEF2 50804 Affinity Capture-MS Homo sapiens 33 PRR11   Affinity Capture-MS Homo sapiens 34 WHSC1 7468 Affinity Capture-MS Homo sapiens 35 CEP70   Two-hybrid Homo sapiens Two-hybrid Homo sapiens 36 KLF8   Affinity Capture-MS Homo sapiens 37 DDX24 57062 Affinity Capture-MS Homo sapiens Affinity Capture-MS Homo sapiens 38 CCDC137   Affinity Capture-MS Homo sapiens Affinity Capture-MS Homo sapiens 39 RRP12 23223 Affinity Capture-MS Homo sapiens Affinity Capture-MS Homo sapiens 40 FBXW7   Affinity Capture-MS Homo sapiens 41 NPM1 4869 Affinity Capture-MS Homo sapiens Affinity Capture-MS Homo sapiens 42 FBL 2091 Affinity Capture-MS Homo sapiens Proximity Label-MS Homo sapiens 43 POLR1E   Proximity Label-MS Homo sapiens 44 SPTY2D1   Affinity Capture-MS Homo sapiens Affinity Capture-MS Homo sapiens 45 RPF2 84154 Affinity Capture-MS Homo sapiens Affinity Capture-MS Homo sapiens 46 TTF1   Affinity Capture-MS Homo sapiens Affinity Capture-MS Homo sapiens 47 STAU2 27067 Affinity Capture-MS Homo sapiens 48 Nhp2l1 20826 Affinity Capture-MS Mus musculus 49 BRD4 23476 Affinity Capture-MS Homo sapiens 50 SLX4   Affinity Capture-MS Homo sapiens 51 NOC3L 64318 Affinity Capture-MS Homo sapiens Affinity Capture-MS Homo sapiens 52 RRP8   Affinity Capture-MS Homo sapiens Affinity Capture-MS Homo sapiens 53 CUL1 8454 Affinity Capture-MS Homo sapiens 54 MYCN   Affinity Capture-MS Homo sapiens 55 STAU1 6780 Affinity Capture-MS Homo sapiens Affinity Capture-MS Homo sapiens 56 ADARB2   Affinity Capture-MS Homo sapiens 57 MAK16   Affinity Capture-MS Homo sapiens Affinity Capture-MS Homo sapiens 58 NEIL3   Affinity Capture-MS Homo sapiens 59 KIF14 9928 Affinity Capture-MS Homo sapiens 60 GAR1 54433 Affinity Capture-MS Homo sapiens 61 FCF1   Affinity Capture-MS Homo sapiens 62 SAMHD1 25939 Affinity Capture-MS Homo sapiens 63 KLF16   Proximity Label-MS Homo sapiens Affinity Capture-MS Homo sapiens 64 DDX31   Affinity Capture-MS Homo sapiens Affinity Capture-MS Homo sapiens 65 KIAA0020 9933 Affinity Capture-MS Homo sapiens Affinity Capture-MS Homo sapiens 66 MYB   Proximity Label-MS Homo sapiens 67 HIST1H4A 8359 Affinity Capture-MS Homo sapiens 68 DDX21 9188 Affinity Capture-MS Homo sapiens Affinity Capture-MS Homo sapiens 69 RPL4 6124 Affinity Capture-MS Homo sapiens Affinity Capture-MS Homo sapiens 70 RBM28 55131 Affinity Capture-MS Homo sapiens Affinity Capture-MS Homo sapiens 71 Rock1   Affinity Capture-MS Mus musculus 72 TARBP2   Affinity Capture-MS Homo sapiens 73 RRP9 9136 Affinity Capture-MS Homo sapiens 74 RBM4B   Affinity Capture-MS Homo sapiens 75 GZF1   Affinity Capture-MS Homo sapiens Affinity Capture-MS Homo sapiens 76 NOP2 4839 Affinity Capture-MS Homo sapiens 77 CBX3 11335 Proximity Label-MS Homo sapiens 78 HIST1H2AM 8336 Affinity Capture-MS Homo sapiens 79 RPL18A 6142 Affinity Capture-MS Homo sapiens 80 NTRK1 4914 Affinity Capture-MS Homo sapiens 81 RPL31 6160 Proximity Label-MS Homo sapiens Affinity Capture-MS Homo sapiens 82 IFI16 3428 Affinity Capture-MS Homo sapiens 83 ZNF354A   Affinity Capture-MS Homo sapiens Affinity Capture-MS Homo sapiens 84 Emc6   Affinity Capture-MS Mus musculus 85 RBMX2   Affinity Capture-MS Homo sapiens Affinity Capture-MS Homo sapiens 86 RPL36 25873 Affinity Capture-MS Homo sapiens 87 HIST1H2BG 8339 Proximity Label-MS Homo sapiens 88 LYAR 55646 Affinity Capture-MS Homo sapiens 89 HECTD1 25831 Affinity Capture-MS Homo sapiens 90 RPLP0 6175 Affinity Capture-MS Homo sapiens 91 MAGEB2 4113 Affinity Capture-MS Homo sapiens 92 MYBBP1A 10514 Affinity Capture-MS Homo sapiens Affinity Capture-MS Homo sapiens 93 DDX27 55661 Affinity Capture-MS Homo sapiens Affinity Capture-MS Homo sapiens 94 GTPBP4 23560 Affinity Capture-MS Homo sapiens Affinity Capture-MS Homo sapiens 95 DAXX   Affinity Capture-MS Homo sapiens 96 OGT 8473 Reconstituted Complex Homo sapiens 97 CD3EAP   Proximity Label-MS Homo sapiens 98 DDAH2 23564 Affinity Capture-MS Homo sapiens 99 RSL1D1 26156 Affinity Capture-MS Homo sapiens 100 SCARNA22   Affinity Capture-RNA Homo sapiens 101 FGFBP1 9982 Affinity Capture-MS Homo sapiens 102 PPAN-P2RY11   Affinity Capture-MS Homo sapiens 103 Cdkn2aip   Affinity Capture-MS Mus musculus 104 RPL32 6161 Affinity Capture-MS Homo sapiens 105 ZBTB2 57621 Affinity Capture-MS Homo sapiens 106 CRKL 1399 Affinity Capture-MS Homo sapiens 107 HIST1H3A 8350 Proximity Label-MS Homo sapiens 108 ABT1 29777 Affinity Capture-MS Homo sapiens 109 POP1 10940 Affinity Capture-MS Homo sapiens 110 EIF6 3692 Proximity Label-MS Homo sapiens 111 RC3H2   Affinity Capture-MS Homo sapiens 112 ECT2 1894 Affinity Capture-MS Homo sapiens 113 ZNF701   Affinity Capture-MS Homo sapiens Affinity Capture-MS Homo sapiens 114 RPL35 11224 Affinity Capture-MS Homo sapiens 115 NOC4L 79050 Affinity Capture-MS Homo sapiens Affinity Capture-MS Homo sapiens 116 NAT10 55226 Affinity Capture-MS Homo sapiens 117 PCDHB15   Affinity Capture-MS Homo sapiens 118 SRSF1 6426 Affinity Capture-MS Homo sapiens 119 ZNF624 57547 Affinity Capture-MS Homo sapiens Affinity Capture-MS Homo sapiens 120 CUL3 8452 Affinity Capture-MS Homo sapiens 121 RPS6 6194 Proximity Label-MS Homo sapiens Affinity Capture-MS Homo sapiens 122 RPL3 6122 Affinity Capture-MS Homo sapiens 123 EBNA1BP2 10969 Affinity Capture-MS Homo sapiens Affinity Capture-MS Homo sapiens 124 PAPD5 64282 Affinity Capture-MS Homo sapiens 125 CCDC155   Two-hybrid Homo sapiens Two-hybrid Homo sapiens 126 DHX30 22907 Affinity Capture-MS Homo sapiens 127 BBX 56987 Affinity Capture-MS Homo sapiens Affinity Capture-MS Homo sapiens 128 ZC3H10   Affinity Capture-MS Homo sapiens 129 Vps4b 20479 Affinity Capture-MS Mus musculus 130 ZNF512   Affinity Capture-MS Homo sapiens Affinity Capture-MS Homo sapiens 131 LRPAP1 4043 Affinity Capture-MS Homo sapiens 132 DKC1 1736 Affinity Capture-MS Homo sapiens 133 MYC   Affinity Capture-MS Homo sapiens 134 RPA3 6119 Proximity Label-MS Homo sapiens 135 NLRP3   Affinity Capture-MS Homo sapiens 136 CEBPZ   Affinity Capture-MS Homo sapiens Affinity Capture-MS Homo sapiens 137 Mis12   Affinity Capture-MS Mus musculus 138 NOL12 79159 Affinity Capture-MS Homo sapiens Affinity Capture-MS Homo sapiens 139 RBM19 9904 Affinity Capture-MS Homo sapiens Affinity Capture-MS Homo sapiens 140 RPA4   Proximity Label-MS Homo sapiens 141 HP1BP3 50809 Affinity Capture-MS Homo sapiens 142 HIST1H1A 3024 Affinity Capture-MS Homo sapiens 143 RPL7L1 285855 Affinity Capture-MS Homo sapiens 144 DDRGK1 65992 Affinity Capture-MS Homo sapiens 145 RNF2   Affinity Capture-MS Homo sapiens 146 ZC3HAV1 56829 Affinity Capture-MS Homo sapiens Affinity Capture-MS Homo sapiens Affinity Capture-MS Homo sapiens 147 ZFP62   Affinity Capture-MS Homo sapiens Affinity Capture-MS Homo sapiens 148 LMNA 4000 Proximity Label-MS Homo sapiens 149 DDX52   Affinity Capture-MS Homo sapiens 150 FTSJ3 117246 Affinity Capture-MS Homo sapiens Affinity Capture-MS Homo sapiens 151 RPL11 6135 Affinity Capture-MS Homo sapiens 152 NGDN   Affinity Capture-MS Homo sapiens Affinity Capture-MS Homo sapiens 153 C3orf17   Affinity Capture-MS Homo sapiens Affinity Capture-MS Homo sapiens 154 NES 10763 Affinity Capture-MS Homo sapiens 155 RPL13 6137 Affinity Capture-MS Homo sapiens 156 SURF6   Affinity Capture-MS Homo sapiens Affinity Capture-MS Homo sapiens 157 FASN 2194 Positive Genetic Homo sapiens 158 FYTTD1   Affinity Capture-MS Homo sapiens 159 RNF151   Affinity Capture-MS Homo sapiens 160 PARP1 142 Proximity Label-MS Homo sapiens 161 FBXL6   Affinity Capture-MS Homo sapiens Proximity Label-MS Homo sapiens 162 RRS1 23212 Affinity Capture-MS Homo sapiens Affinity Capture-MS Homo sapiens 163 CIT 11113 Affinity Capture-MS Homo sapiens 164 PRDM15   Affinity Capture-MS Homo sapiens 165 NLE1 54475 Affinity Capture-MS Homo sapiens Affinity Capture-MS Homo sapiens 166 MNDA 4332 Affinity Capture-MS Homo sapiens 167 USP36   Affinity Capture-MS Homo sapiens 168 DGCR8   Affinity Capture-MS Homo sapiens 169 UTP23   Affinity Capture-MS Homo sapiens 170 NSA2   Affinity Capture-MS Homo sapiens 171 MFAP1   Affinity Capture-MS Homo sapiens 172 MKI67   Affinity Capture-MS Homo sapiens 173 NIFK 84365 Proximity Label-MS Homo sapiens Affinity Capture-MS Homo sapiens 174 BRIX1 55299 Affinity Capture-MS Homo sapiens Affinity Capture-MS Homo sapiens 175 DHX40   Proximity Label-MS Homo sapiens 176 NUP50 10762 Proximity Label-MS Homo sapiens 177 RPS24 6229 Proximity Label-MS Homo sapiens 178 SP100 6672 Affinity Capture-MS Homo sapiens 179 RPL30 6156 Affinity Capture-MS Homo sapiens 180 TRIP4 9325 Affinity Capture-MS Homo sapiens 181 RPL7A 6130 Affinity Capture-MS Homo sapiens Affinity Capture-MS Homo sapiens 182 NUFIP1   Affinity Capture-MS Homo sapiens Affinity Capture-MS Homo sapiens 183 RPS8 6202 Affinity Capture-MS Homo sapiens Affinity Capture-MS Homo sapiens 184 GRSF1 2926 Proximity Label-MS Homo sapiens 185 GLYR1 84656 Affinity Capture-MS Homo sapiens 186 OAZ1 4946 Affinity Capture-MS Homo sapiens 187 NMNAT1   Affinity Capture-MS Homo sapiens Affinity Capture-MS Homo sapiens 188 ZNF845   Affinity Capture-MS Homo sapiens Affinity Capture-MS Homo sapiens 189 RC3H1 149041 Affinity Capture-MS Homo sapiens 190 NVL   Affinity Capture-MS Homo sapiens Affinity Capture-MS Homo sapiens 191 DDX56   Affinity Capture-MS Homo sapiens Affinity Capture-MS Homo sapiens 192 HERC5 51191 Affinity Capture-MS Homo sapiens Affinity Capture-MS Homo sapiens 193 NHLH1   Proximity Label-MS Homo sapiens View the network

Pathways in which GPATCH4 is involved

No pathways found