Gene ontology annotations for RFC4 |
|
Experiment description of studies that identified RFC4 in exosomes |
1 |
Experiment ID |
489 |
MISEV standards |
✔
EM
|
Biophysical techniques |
✔
Cd9|Cd81|Cd63|Gapdh|Sdcbp|Lamp1|Aqp1|Rab5a|Icam1|Cd82|Itga2b|Tsg101|Lamp2|Rab35|Flot1|Flot2|Cd151|Rab5b|Tfrc|Uchl1
|
Enriched markers |
✔
Canx
|
Negative markers |
✔
NTA
|
Particle analysis
|
|
Identified molecule |
Protein
|
Identification method |
Mass spectrometry
|
PubMed ID |
36408942
|
Organism |
Rattus norvegicus |
Experiment description |
Quantitative proteomic analysis of exosomes from umbilical cord mesenchymal stem cells and rat bone marrow stem cells |
Authors |
"Xu X, Yin F, Guo M, Gan G, Lin G, Wen C, Wang J, Song P, Wang J, Qi ZQ, Zhong CQ." |
Journal name |
Proteomics
|
Publication year |
2023 |
Sample |
Bone marrow mesenchymal stem cells |
Sample name |
BMSC - Passage 6 |
Isolation/purification methods |
Differential centrifugation Filtration Ultracentrifugation |
Flotation density |
-
|
Molecules identified in the study |
Protein |
Methods used in the study |
Western blotting Mass spectometry |
|
|
2 |
Experiment ID |
490 |
MISEV standards |
✔
EM
|
Biophysical techniques |
✔
Cd9|Cd81|Cd63|Gapdh|Sdcbp|Lamp1|Aqp1|Rab5a|Icam1|Cd82|Itga2b|Tsg101|Lamp2|Rab35|Flot1|Flot2|Cd151|Rab5b|Tfrc|Uchl1
|
Enriched markers |
✔
Canx
|
Negative markers |
✔
NTA
|
Particle analysis
|
|
Identified molecule |
Protein
|
Identification method |
Mass spectrometry
|
PubMed ID |
36408942
|
Organism |
Rattus norvegicus |
Experiment description |
Quantitative proteomic analysis of exosomes from umbilical cord mesenchymal stem cells and rat bone marrow stem cells |
Authors |
"Xu X, Yin F, Guo M, Gan G, Lin G, Wen C, Wang J, Song P, Wang J, Qi ZQ, Zhong CQ." |
Journal name |
Proteomics
|
Publication year |
2023 |
Sample |
Bone marrow mesenchymal stem cells |
Sample name |
BMSC - Passage 7 |
Isolation/purification methods |
Differential centrifugation Filtration Ultracentrifugation |
Flotation density |
-
|
Molecules identified in the study |
Protein |
Methods used in the study |
Western blotting Mass spectometry |
|
|
3 |
Experiment ID |
491 |
MISEV standards |
✔
EM
|
Biophysical techniques |
✔
Cd9|Cd81|Cd63|Gapdh|Sdcbp|Lamp1|Aqp1|Rab5a|Icam1|Cd82|Itga2b|Tsg101|Lamp2|Rab35|Flot1|Flot2|Cd151|Rab5b|Tfrc|Uchl1
|
Enriched markers |
✔
Canx
|
Negative markers |
✔
NTA
|
Particle analysis
|
|
Identified molecule |
Protein
|
Identification method |
Mass spectrometry
|
PubMed ID |
36408942
|
Organism |
Rattus norvegicus |
Experiment description |
Quantitative proteomic analysis of exosomes from umbilical cord mesenchymal stem cells and rat bone marrow stem cells |
Authors |
"Xu X, Yin F, Guo M, Gan G, Lin G, Wen C, Wang J, Song P, Wang J, Qi ZQ, Zhong CQ." |
Journal name |
Proteomics
|
Publication year |
2023 |
Sample |
Bone marrow mesenchymal stem cells |
Sample name |
BMSC - Passage 8 |
Isolation/purification methods |
Differential centrifugation Filtration Ultracentrifugation |
Flotation density |
-
|
Molecules identified in the study |
Protein |
Methods used in the study |
Western blotting Mass spectometry |
|
|
4 |
Experiment ID |
492 |
MISEV standards |
✔
EM
|
Biophysical techniques |
✔
Cd9|Cd81|Cd63|Gapdh|Sdcbp|Lamp1|Aqp1|Rab5a|Icam1|Cd82|Itga2b|Tsg101|Lamp2|Rab35|Flot1|Flot2|Cd151|Rab5b|Tfrc|Uchl1
|
Enriched markers |
✔
Canx
|
Negative markers |
✔
NTA
|
Particle analysis
|
|
Identified molecule |
Protein
|
Identification method |
Mass spectrometry
|
PubMed ID |
36408942
|
Organism |
Rattus norvegicus |
Experiment description |
Quantitative proteomic analysis of exosomes from umbilical cord mesenchymal stem cells and rat bone marrow stem cells |
Authors |
"Xu X, Yin F, Guo M, Gan G, Lin G, Wen C, Wang J, Song P, Wang J, Qi ZQ, Zhong CQ." |
Journal name |
Proteomics
|
Publication year |
2023 |
Sample |
Bone marrow mesenchymal stem cells |
Sample name |
BMSC - Passage 9 |
Isolation/purification methods |
Differential centrifugation Filtration Ultracentrifugation |
Flotation density |
-
|
Molecules identified in the study |
Protein |
Methods used in the study |
Western blotting Mass spectometry |
|
|
5 |
Experiment ID |
426 |
MISEV standards |
✘
|
Biophysical techniques |
✔
SDCBP|FLOT1|CD81|CD9|CD151|FLOT2|TSG101|LAMP1|TFRC|RAB5A|RAB35|GAPDH|UCHL1|ICAM1
|
Enriched markers |
✔
CANX
|
Negative markers |
✘
|
Particle analysis
|
|
Identified molecule |
Protein
|
Identification method |
Mass spectrometry
|
PubMed ID |
34108659
|
Organism |
Homo sapiens |
Experiment description |
Quantitative Proteomics Identifies the Core Proteome of Exosomes with Syntenin-1 as the highest abundant protein and a Putative Universal Biomarker |
Authors |
"Kugeratski FG, Hodge K, Lilla S, McAndrews KM, Zhou X, Hwang RF, Zanivan S, Kalluri R." |
Journal name |
Nat Cell Biol
|
Publication year |
2021 |
Sample |
Breast cancer cells |
Sample name |
MDA-MB-231 - Exo-rich fractions 7-10 pooled |
Isolation/purification methods |
Differential centrifugation Filtration Ultracentrifugation Size exclusion chromatography |
Flotation density |
-
|
Molecules identified in the study |
Protein |
Methods used in the study |
Western blotting Mass spectrometry |
|
|
6 |
Experiment ID |
427 |
MISEV standards |
✘
|
Biophysical techniques |
✔
CD81|SDCBP|FLOT1|CD9|CD151|FLOT2|TSG101|LAMP1|TFRC|RAB5A|RAB35|GAPDH|UCHL1|ICAM1
|
Enriched markers |
✔
CANX
|
Negative markers |
✘
|
Particle analysis
|
|
Identified molecule |
Protein
|
Identification method |
Mass spectrometry
|
PubMed ID |
34108659
|
Organism |
Homo sapiens |
Experiment description |
Quantitative Proteomics Identifies the Core Proteome of Exosomes with Syntenin-1 as the highest abundant protein and a Putative Universal Biomarker |
Authors |
"Kugeratski FG, Hodge K, Lilla S, McAndrews KM, Zhou X, Hwang RF, Zanivan S, Kalluri R." |
Journal name |
Nat Cell Biol
|
Publication year |
2021 |
Sample |
Breast cancer cells |
Sample name |
MDA-MB-231 - Exo-rich fractions 1-6 pooled |
Isolation/purification methods |
Differential centrifugation Filtration Ultracentrifugation OptiPrep density gradient centrifugation |
Flotation density |
-
|
Molecules identified in the study |
Protein |
Methods used in the study |
Mass spectrometry |
|
|
7 |
Experiment ID |
497 |
MISEV standards |
✘
|
Biophysical techniques |
✔
CD9|CD151|CD63|CD81|CD82|FLOT1|FLOT2|GAPDH|LAMP1|LAMP2|RAB5A|SDCBP|TFRC|TSG101|UCHL1
|
Enriched markers |
✘
|
Negative markers |
✔
NTA
|
Particle analysis
|
|
Identified molecule |
Protein
|
Identification method |
Mass spectrometry
|
PubMed ID |
35931686
|
Organism |
Homo sapiens |
Experiment description |
Extracellular vesicles enriched in connexin 43 promote a senescent phenotype in bone and synovial cells contributing to osteoarthritis progression |
Authors |
"Varela-EirÃÂn M, Carpintero-Fernández P, Guitián-Caamaño A, Varela-Vázquez A, GarcÃÂa-Yuste A, Sánchez-Temprano A, Bravo-López SB, Yañez-Cabanas J, Fonseca E, Largo R, Mobasheri A, Caeiro JR, Mayán MD." |
Journal name |
Cell Death Dis
|
Publication year |
2022 |
Sample |
Chondrocytes |
Sample name |
T/C-28a2 |
Isolation/purification methods |
Differential centrifugation Filtration Ultracentrifugation |
Flotation density |
-
|
Molecules identified in the study |
Protein |
Methods used in the study |
Western blotting Mass spectometry |
|
|
8 |
Experiment ID |
498 |
MISEV standards |
✔
EM
|
Biophysical techniques |
✔
CD9|CD151|CD63|CD81|CD82|FLOT1|FLOT2|GAPDH|LAMP1|LAMP2|RAB5A|SDCBP|TFRC|TSG101|UCHL1
|
Enriched markers |
✘
|
Negative markers |
✔
NTA
|
Particle analysis
|
|
Identified molecule |
Protein
|
Identification method |
Mass spectrometry
|
PubMed ID |
35931686
|
Organism |
Homo sapiens |
Experiment description |
Extracellular vesicles enriched in connexin 43 promote a senescent phenotype in bone and synovial cells contributing to osteoarthritis progression |
Authors |
"Varela-EirÃÂn M, Carpintero-Fernández P, Guitián-Caamaño A, Varela-Vázquez A, GarcÃÂa-Yuste A, Sánchez-Temprano A, Bravo-López SB, Yañez-Cabanas J, Fonseca E, Largo R, Mobasheri A, Caeiro JR, Mayán MD." |
Journal name |
Cell Death Dis
|
Publication year |
2022 |
Sample |
Chondrocytes |
Sample name |
T/C-28a2 |
Isolation/purification methods |
Differential centrifugation Filtration Ultracentrifugation |
Flotation density |
-
|
Molecules identified in the study |
Protein |
Methods used in the study |
Western blotting Mass spectometry |
|
|
9 |
Experiment ID |
207 |
MISEV standards |
✔
EM
|
Biophysical techniques |
✔
TSG101|HSP70|FLOT1
|
Enriched markers |
✔
VDAC
|
Negative markers |
✔
NTA
|
Particle analysis
|
|
Identified molecule |
protein
|
Identification method |
Mass spectrometry
|
PubMed ID |
23161513
|
Organism |
Homo sapiens |
Experiment description |
Proteomic analysis of exosomes from mutant KRAS colon cancer cells identifies intercellular transfer of mutant KRAS. |
Authors |
"Demory Beckler M, Higginbotham JN, Franklin JL, Ham AJ, Halvey PJ, Imasuen IE, Whitwell C, Li M, Liebler DC, Coffey RJ." |
Journal name |
Mol Cell Proteomics
|
Publication year |
2012 |
Sample |
Colorectal cancer cells |
Sample name |
DKO-1 |
Isolation/purification methods |
Differential centrifugation Filtration |
Flotation density |
-
|
Molecules identified in the study |
Protein |
Methods used in the study |
Mass spectrometry |
|
|
10 |
Experiment ID |
208 |
MISEV standards |
✔
EM
|
Biophysical techniques |
✔
TSG101|HSP70|FLOT1
|
Enriched markers |
✔
VDAC
|
Negative markers |
✔
NTA
|
Particle analysis
|
|
Identified molecule |
protein
|
Identification method |
Mass spectrometry
|
PubMed ID |
23161513
|
Organism |
Homo sapiens |
Experiment description |
Proteomic analysis of exosomes from mutant KRAS colon cancer cells identifies intercellular transfer of mutant KRAS. |
Authors |
"Demory Beckler M, Higginbotham JN, Franklin JL, Ham AJ, Halvey PJ, Imasuen IE, Whitwell C, Li M, Liebler DC, Coffey RJ." |
Journal name |
Mol Cell Proteomics
|
Publication year |
2012 |
Sample |
Colorectal cancer cells |
Sample name |
Dks-8 |
Isolation/purification methods |
Differential centrifugation Filtration |
Flotation density |
-
|
Molecules identified in the study |
Protein |
Methods used in the study |
Mass spectrometry |
|
|
11 |
Experiment ID |
209 |
MISEV standards |
✘
|
Biophysical techniques |
✔
TSG101|HSP70|FLOT1
|
Enriched markers |
✔
VDAC
|
Negative markers |
✔
NTA
|
Particle analysis
|
|
Identified molecule |
protein
|
Identification method |
Mass spectrometry
|
PubMed ID |
23161513
|
Organism |
Homo sapiens |
Experiment description |
Proteomic analysis of exosomes from mutant KRAS colon cancer cells identifies intercellular transfer of mutant KRAS. |
Authors |
"Demory Beckler M, Higginbotham JN, Franklin JL, Ham AJ, Halvey PJ, Imasuen IE, Whitwell C, Li M, Liebler DC, Coffey RJ." |
Journal name |
Mol Cell Proteomics
|
Publication year |
2012 |
Sample |
Colorectal cancer cells |
Sample name |
DLD-1 |
Isolation/purification methods |
Differential centrifugation Filtration |
Flotation density |
-
|
Molecules identified in the study |
Protein |
Methods used in the study |
Mass spectrometry |
|
|
12 |
Experiment ID |
419 |
MISEV standards |
✘
|
Biophysical techniques |
✔
SDCBP|FLOT1|CD81|CD9|CD151|FLOT2|TSG101|LAMP1|TFRC|RAB5A|RAB35|GAPDH|UCHL1|ICAM1
|
Enriched markers |
✔
CANX
|
Negative markers |
✘
|
Particle analysis
|
|
Identified molecule |
Protein
|
Identification method |
Mass spectrometry
|
PubMed ID |
34108659
|
Organism |
Homo sapiens |
Experiment description |
Quantitative Proteomics Identifies the Core Proteome of Exosomes with Syntenin-1 as the highest abundant protein and a Putative Universal Biomarker |
Authors |
"Kugeratski FG, Hodge K, Lilla S, McAndrews KM, Zhou X, Hwang RF, Zanivan S, Kalluri R." |
Journal name |
Nat Cell Biol
|
Publication year |
2021 |
Sample |
Embryonic kidney cells |
Sample name |
HEK293T - Exo-rich fractions 7-10 pooled |
Isolation/purification methods |
Differential centrifugation Filtration Ultracentrifugation Size exclusion chromatography |
Flotation density |
-
|
Molecules identified in the study |
Protein |
Methods used in the study |
Western blotting Mass spectrometry |
|
|
13 |
Experiment ID |
419 |
MISEV standards |
✘
|
Biophysical techniques |
✔
SDCBP|FLOT1|CD81|CD9|CD151|FLOT2|TSG101|LAMP1|TFRC|RAB5A|RAB35|GAPDH|UCHL1|ICAM1
|
Enriched markers |
✔
CANX
|
Negative markers |
✘
|
Particle analysis
|
|
Identified molecule |
Protein
|
Identification method |
Mass spectrometry
|
PubMed ID |
34108659
|
Organism |
Homo sapiens |
Experiment description |
Quantitative Proteomics Identifies the Core Proteome of Exosomes with Syntenin-1 as the highest abundant protein and a Putative Universal Biomarker |
Authors |
"Kugeratski FG, Hodge K, Lilla S, McAndrews KM, Zhou X, Hwang RF, Zanivan S, Kalluri R." |
Journal name |
Nat Cell Biol
|
Publication year |
2021 |
Sample |
Embryonic kidney cells |
Sample name |
HEK293T - Exo-rich fractions 7-10 pooled |
Isolation/purification methods |
Differential centrifugation Filtration Ultracentrifugation Size exclusion chromatography |
Flotation density |
-
|
Molecules identified in the study |
Protein |
Methods used in the study |
Western blotting Mass spectrometry |
|
|
14 |
Experiment ID |
420 |
MISEV standards |
✘
|
Biophysical techniques |
✔
CD81|SDCBP|FLOT1|CD9|CD151|FLOT2|TSG101|LAMP1|TFRC|RAB5A|RAB35|GAPDH|UCHL1|ICAM1
|
Enriched markers |
✔
CANX
|
Negative markers |
✘
|
Particle analysis
|
|
Identified molecule |
Protein
|
Identification method |
Mass spectrometry
|
PubMed ID |
34108659
|
Organism |
Homo sapiens |
Experiment description |
Quantitative Proteomics Identifies the Core Proteome of Exosomes with Syntenin-1 as the highest abundant protein and a Putative Universal Biomarker |
Authors |
"Kugeratski FG, Hodge K, Lilla S, McAndrews KM, Zhou X, Hwang RF, Zanivan S, Kalluri R." |
Journal name |
Nat Cell Biol
|
Publication year |
2021 |
Sample |
Embryonic kidney cells |
Sample name |
HEK293T - Exo-rich fractions 1-6 pooled |
Isolation/purification methods |
Differential centrifugation Filtration Ultracentrifugation OptiPrep density gradient centrifugation |
Flotation density |
-
|
Molecules identified in the study |
Protein |
Methods used in the study |
Mass spectrometry |
|
|
15 |
Experiment ID |
420 |
MISEV standards |
✘
|
Biophysical techniques |
✔
CD81|SDCBP|FLOT1|CD9|CD151|FLOT2|TSG101|LAMP1|TFRC|RAB5A|RAB35|GAPDH|UCHL1|ICAM1
|
Enriched markers |
✔
CANX
|
Negative markers |
✘
|
Particle analysis
|
|
Identified molecule |
Protein
|
Identification method |
Mass spectrometry
|
PubMed ID |
34108659
|
Organism |
Homo sapiens |
Experiment description |
Quantitative Proteomics Identifies the Core Proteome of Exosomes with Syntenin-1 as the highest abundant protein and a Putative Universal Biomarker |
Authors |
"Kugeratski FG, Hodge K, Lilla S, McAndrews KM, Zhou X, Hwang RF, Zanivan S, Kalluri R." |
Journal name |
Nat Cell Biol
|
Publication year |
2021 |
Sample |
Embryonic kidney cells |
Sample name |
HEK293T - Exo-rich fractions 1-6 pooled |
Isolation/purification methods |
Differential centrifugation Filtration Ultracentrifugation OptiPrep density gradient centrifugation |
Flotation density |
-
|
Molecules identified in the study |
Protein |
Methods used in the study |
Mass spectrometry |
|
|
16 |
Experiment ID |
488 |
MISEV standards |
✔
EM
|
Biophysical techniques |
✔
CD9|CD81|CD63|GAPDH|SDCBP|LAMP1|TFRC|UCHL1|FLOT2|LAMP2|FLOT1|ICAM1|RAB5B|CD151|RAB35|TSG101|RAB5A|CD82
|
Enriched markers |
✔
CANX
|
Negative markers |
✔
NTA
|
Particle analysis
|
|
Identified molecule |
Protein
|
Identification method |
Mass spectrometry
|
PubMed ID |
36408942
|
Organism |
Homo sapiens |
Experiment description |
Quantitative proteomic analysis of exosomes from umbilical cord mesenchymal stem cells and rat bone marrow stem cells |
Authors |
"Xu X, Yin F, Guo M, Gan G, Lin G, Wen C, Wang J, Song P, Wang J, Qi ZQ, Zhong CQ." |
Journal name |
Proteomics
|
Publication year |
2023 |
Sample |
Mesenchymal stem cells |
Sample name |
UCMSC |
Isolation/purification methods |
Differential centrifugation Filtration Ultracentrifugation |
Flotation density |
-
|
Molecules identified in the study |
Protein |
Methods used in the study |
Western blotting Mass spectometry |
|
|
17 |
Experiment ID |
434 |
MISEV standards |
✘
|
Biophysical techniques |
✔
SDCBP|FLOT1|CD81|CD9|CD151|FLOT2|TSG101|LAMP1|TFRC|RAB5A|RAB35|GAPDH|UCHL1|ICAM1
|
Enriched markers |
✔
CANX
|
Negative markers |
✘
|
Particle analysis
|
|
Identified molecule |
Protein
|
Identification method |
Mass spectrometry
|
PubMed ID |
34108659
|
Organism |
Homo sapiens |
Experiment description |
Quantitative Proteomics Identifies the Core Proteome of Exosomes with Syntenin-1 as the highest abundant protein and a Putative Universal Biomarker |
Authors |
"Kugeratski FG, Hodge K, Lilla S, McAndrews KM, Zhou X, Hwang RF, Zanivan S, Kalluri R." |
Journal name |
Nat Cell Biol
|
Publication year |
2021 |
Sample |
Pancreatic cancer cells |
Sample name |
PANC-1 - Exo-rich fractions 7-10 pooled |
Isolation/purification methods |
Differential centrifugation Filtration Ultracentrifugation Size exclusion chromatography |
Flotation density |
-
|
Molecules identified in the study |
Protein |
Methods used in the study |
Western blotting Mass spectrometry |
|
|
18 |
Experiment ID |
435 |
MISEV standards |
✘
|
Biophysical techniques |
✔
CD81|SDCBP|FLOT1|CD9|CD151|FLOT2|TSG101|LAMP1|TFRC|RAB5A|RAB35|GAPDH|UCHL1|ICAM1
|
Enriched markers |
✔
CANX
|
Negative markers |
✘
|
Particle analysis
|
|
Identified molecule |
Protein
|
Identification method |
Mass spectrometry
|
PubMed ID |
34108659
|
Organism |
Homo sapiens |
Experiment description |
Quantitative Proteomics Identifies the Core Proteome of Exosomes with Syntenin-1 as the highest abundant protein and a Putative Universal Biomarker |
Authors |
"Kugeratski FG, Hodge K, Lilla S, McAndrews KM, Zhou X, Hwang RF, Zanivan S, Kalluri R." |
Journal name |
Nat Cell Biol
|
Publication year |
2021 |
Sample |
Pancreatic cancer cells |
Sample name |
PANC-1 - Exo-rich fractions 1-6 pooled |
Isolation/purification methods |
Differential centrifugation Filtration Ultracentrifugation OptiPrep density gradient centrifugation |
Flotation density |
-
|
Molecules identified in the study |
Protein |
Methods used in the study |
Mass spectrometry |
|
|
19 |
Experiment ID |
191 |
MISEV standards |
✘
|
Biophysical techniques |
✔
Alix|CD81|CD9
|
Enriched markers |
✘
|
Negative markers |
✘
|
Particle analysis
|
|
Identified molecule |
protein
|
Identification method |
Mass spectrometry
|
PubMed ID |
20124223
|
Organism |
Homo sapiens |
Experiment description |
Hypoxic tumor cell modulates its microenvironment to enhance angiogenic and metastatic potential by secretion of proteins and exosomes. |
Authors |
"Park JE, Tan HS, Datta A, Lai RC, Zhang H, Meng W, Lim SK, Sze SK." |
Journal name |
Mol Cell Proteomics
|
Publication year |
2010 |
Sample |
Squamous carcinoma cells |
Sample name |
Squamous carcinoma cell (A431) |
Isolation/purification methods |
Differential centrifugation |
Flotation density |
-
|
Molecules identified in the study |
Protein |
Methods used in the study |
Mass spectrometry |
|
|
20 |
Experiment ID |
217 |
MISEV standards |
✔
EM
|
Biophysical techniques |
✔
TSG101|CD81|CD9|CD63
|
Enriched markers |
✘
|
Negative markers |
✔
NTA
|
Particle analysis
|
|
Identified molecule |
protein
|
Identification method |
Mass spectrometry
|
PubMed ID |
23844026
|
Organism |
Homo sapiens |
Experiment description |
Characterization of human thymic exosomes. |
Authors |
"Skogberg G, Gudmundsdottir J, van der Post S, Sandstrom K, Bruhn S, Benson M, Mincheva-Nilsson L, Baranov V, Telemo E, Ekwall O." |
Journal name |
PLoS One
|
Publication year |
2013 |
Sample |
Thymus |
Sample name |
Normal-Thymus |
Isolation/purification methods |
Differential centrifugation Filtration Ultracentrifugation |
Flotation density |
-
|
Molecules identified in the study |
Protein |
Methods used in the study |
Mass spectrometry |
|
|
Protein-protein interactions for RFC4 |
|
Protein Interactor |
ExoCarta ID |
Identification method |
PubMed |
Species |
1 |
FAN1 |
|
Affinity Capture-MS |
 |
Homo sapiens |
|
2 |
UBE2H |
7328 |
Affinity Capture-MS |
 |
Homo sapiens |
|
3 |
HIST2H2BE |
8349 |
Affinity Capture-MS |
 |
Homo sapiens |
|
4 |
MCM3 |
4172 |
Co-fractionation |
 |
Homo sapiens |
|
5 |
RPL26L1 |
51121 |
Co-fractionation |
 |
Homo sapiens |
|
6 |
SPRTN |
|
Affinity Capture-MS |
 |
Homo sapiens |
|
7 |
QARS |
5859 |
Co-fractionation |
 |
Homo sapiens |
|
8 |
PAXIP1 |
|
Affinity Capture-MS |
 |
Homo sapiens |
|
9 |
PMS1 |
|
Affinity Capture-Western |
 |
Homo sapiens |
|
10 |
MSH6 |
2956 |
Co-fractionation |
 |
Homo sapiens |
|
11 |
TARDBP |
23435 |
Affinity Capture-MS |
 |
Homo sapiens |
|
12 |
RPA2 |
6118 |
Affinity Capture-MS |
 |
Homo sapiens |
|
13 |
NFATC1 |
4772 |
Affinity Capture-MS |
 |
Homo sapiens |
|
14 |
HIST1H2BG |
8339 |
Proximity Label-MS |
 |
Homo sapiens |
|
15 |
ABCF1 |
23 |
Co-fractionation |
 |
Homo sapiens |
|
16 |
NOP56 |
10528 |
Affinity Capture-MS |
 |
Homo sapiens |
|
17 |
RPL10 |
6134 |
Affinity Capture-MS |
 |
Homo sapiens |
|
18 |
TRIM33 |
51592 |
Co-fractionation |
 |
Homo sapiens |
|
19 |
BRD2 |
|
Affinity Capture-MS |
 |
Homo sapiens |
|
20 |
MRE11A |
4361 |
Co-fractionation |
 |
Homo sapiens |
Co-fractionation |
 |
Homo sapiens |
|
21 |
SOX2 |
|
Affinity Capture-MS |
 |
Homo sapiens |
|
22 |
CD58 |
965 |
Affinity Capture-MS |
 |
Homo sapiens |
|
23 |
ILF2 |
3608 |
Co-fractionation |
 |
Homo sapiens |
|
24 |
DIMT1 |
27292 |
Co-fractionation |
 |
Homo sapiens |
|
25 |
PARK2 |
|
Affinity Capture-MS |
 |
Homo sapiens |
|
26 |
IGF2BP3 |
10643 |
Co-fractionation |
 |
Homo sapiens |
|
27 |
KIF23 |
9493 |
Affinity Capture-MS |
 |
Homo sapiens |
|
28 |
HIRIP3 |
|
Affinity Capture-MS |
 |
Homo sapiens |
|
29 |
SPAG9 |
9043 |
Co-fractionation |
 |
Homo sapiens |
|
30 |
RFC3 |
5983 |
Affinity Capture-Western |
 |
Homo sapiens |
Reconstituted Complex |
 |
Homo sapiens |
Co-fractionation |
 |
Homo sapiens |
Co-fractionation |
 |
Homo sapiens |
Two-hybrid |
 |
Homo sapiens |
Reconstituted Complex |
 |
Homo sapiens |
Affinity Capture-MS |
 |
Homo sapiens |
Affinity Capture-MS |
 |
Homo sapiens |
|
31 |
FKBP3 |
2287 |
Co-fractionation |
 |
Homo sapiens |
|
32 |
NPM1 |
4869 |
Affinity Capture-MS |
 |
Homo sapiens |
|
33 |
MDC1 |
|
Affinity Capture-MS |
 |
Homo sapiens |
|
34 |
ATAD5 |
|
Affinity Capture-Western |
 |
Homo sapiens |
Affinity Capture-Western |
 |
Homo sapiens |
Affinity Capture-MS |
 |
Homo sapiens |
Affinity Capture-MS |
 |
Homo sapiens |
Affinity Capture-MS |
 |
Homo sapiens |
|
35 |
ABCE1 |
6059 |
Affinity Capture-MS |
 |
Homo sapiens |
|
36 |
PREX1 |
|
Co-fractionation |
 |
Homo sapiens |
|
37 |
BRD4 |
23476 |
Affinity Capture-Western |
 |
Homo sapiens |
Reconstituted Complex |
 |
Homo sapiens |
Affinity Capture-MS |
 |
Homo sapiens |
Affinity Capture-MS |
 |
Homo sapiens |
Affinity Capture-MS |
 |
Homo sapiens |
Co-fractionation |
 |
Homo sapiens |
|
38 |
SRP68 |
6730 |
Affinity Capture-MS |
 |
Homo sapiens |
|
39 |
MECP2 |
4204 |
Affinity Capture-MS |
 |
Homo sapiens |
|
40 |
Eif3a |
13669 |
Affinity Capture-MS |
 |
Mus musculus |
|
41 |
IL13RA2 |
3598 |
Affinity Capture-MS |
 |
Homo sapiens |
Affinity Capture-MS |
 |
Homo sapiens |
|
42 |
NMT1 |
4836 |
Co-fractionation |
 |
Homo sapiens |
|
43 |
NCSTN |
23385 |
Co-fractionation |
 |
Homo sapiens |
|
44 |
UIMC1 |
|
Affinity Capture-MS |
 |
Homo sapiens |
|
45 |
EDC4 |
23644 |
Co-fractionation |
 |
Homo sapiens |
|
46 |
H2AFZ |
3015 |
Affinity Capture-MS |
 |
Homo sapiens |
|
47 |
SRP9 |
6726 |
Affinity Capture-MS |
 |
Homo sapiens |
|
48 |
RNF41 |
|
Two-hybrid |
 |
Homo sapiens |
Two-hybrid |
 |
Homo sapiens |
Two-hybrid |
 |
Homo sapiens |
|
49 |
FOXA1 |
|
Affinity Capture-MS |
 |
Homo sapiens |
|
50 |
HIST1H4A |
8359 |
Affinity Capture-MS |
 |
Homo sapiens |
|
51 |
RFC5 |
5985 |
Co-purification |
 |
Homo sapiens |
Affinity Capture-MS |
 |
Homo sapiens |
Two-hybrid |
 |
Homo sapiens |
Two-hybrid |
 |
Homo sapiens |
Affinity Capture-Luminescence |
 |
Homo sapiens |
Affinity Capture-MS |
 |
Homo sapiens |
Affinity Capture-MS |
 |
Homo sapiens |
Two-hybrid |
 |
Homo sapiens |
Co-purification |
 |
Homo sapiens |
Affinity Capture-Western |
 |
Homo sapiens |
Co-fractionation |
 |
Homo sapiens |
Reconstituted Complex |
 |
Homo sapiens |
Two-hybrid |
 |
Homo sapiens |
Co-fractionation |
 |
Homo sapiens |
Affinity Capture-MS |
 |
Homo sapiens |
Co-fractionation |
 |
Homo sapiens |
|
52 |
CTDP1 |
9150 |
Affinity Capture-MS |
 |
Homo sapiens |
|
53 |
TGM2 |
7052 |
Co-fractionation |
 |
Homo sapiens |
|
54 |
MEPCE |
56257 |
Affinity Capture-MS |
 |
Homo sapiens |
|
55 |
BLM |
641 |
Co-fractionation |
 |
Homo sapiens |
|
56 |
NBN |
4683 |
Co-fractionation |
 |
Homo sapiens |
|
57 |
POLA2 |
|
Co-fractionation |
 |
Homo sapiens |
|
58 |
RAD9A |
|
Affinity Capture-MS |
 |
Homo sapiens |
|
59 |
TAF9B |
|
Affinity Capture-MS |
 |
Homo sapiens |
Affinity Capture-MS |
 |
Homo sapiens |
|
60 |
RPL5 |
6125 |
Affinity Capture-MS |
 |
Homo sapiens |
|
61 |
Srp72 |
|
Affinity Capture-MS |
 |
Mus musculus |
|
62 |
CHMP4B |
128866 |
Affinity Capture-MS |
 |
Homo sapiens |
|
63 |
NTRK1 |
4914 |
Affinity Capture-MS |
 |
Homo sapiens |
|
64 |
RAD1 |
|
Co-fractionation |
 |
Homo sapiens |
Affinity Capture-MS |
 |
Homo sapiens |
Affinity Capture-MS |
 |
Homo sapiens |
|
65 |
EIF2B2 |
8892 |
Co-fractionation |
 |
Homo sapiens |
|
66 |
PARP1 |
142 |
Affinity Capture-MS |
 |
Homo sapiens |
|
67 |
PML |
5371 |
Affinity Capture-MS |
 |
Homo sapiens |
|
68 |
DHX9 |
1660 |
Co-fractionation |
 |
Homo sapiens |
|
69 |
HECTD1 |
25831 |
Affinity Capture-MS |
 |
Homo sapiens |
|
70 |
SETD3 |
84193 |
Affinity Capture-MS |
 |
Homo sapiens |
|
71 |
CEBPA |
|
Protein-peptide |
 |
Homo sapiens |
|
72 |
DDX1 |
1653 |
Co-fractionation |
 |
Homo sapiens |
|
73 |
BRCA1 |
672 |
Affinity Capture-MS |
 |
Homo sapiens |
|
74 |
LY86 |
|
Affinity Capture-MS |
 |
Homo sapiens |
|
75 |
NEURL4 |
|
Affinity Capture-MS |
 |
Homo sapiens |
|
76 |
ANLN |
54443 |
Affinity Capture-MS |
 |
Homo sapiens |
|
77 |
FBXO45 |
200933 |
Affinity Capture-MS |
 |
Homo sapiens |
|
78 |
TAF12 |
|
Affinity Capture-MS |
 |
Homo sapiens |
Affinity Capture-MS |
 |
Homo sapiens |
|
79 |
CCNA2 |
890 |
Co-fractionation |
 |
Homo sapiens |
|
80 |
HUS1 |
|
Affinity Capture-MS |
 |
Homo sapiens |
|
81 |
FANCD2 |
|
Affinity Capture-MS |
 |
Homo sapiens |
|
82 |
SMARCAD1 |
|
Affinity Capture-MS |
 |
Homo sapiens |
|
83 |
MSH2 |
4436 |
Co-fractionation |
 |
Homo sapiens |
|
84 |
ECT2 |
1894 |
Affinity Capture-MS |
 |
Homo sapiens |
|
85 |
RFC2 |
5982 |
Co-purification |
 |
Homo sapiens |
Co-purification |
 |
Homo sapiens |
Co-fractionation |
 |
Homo sapiens |
Reconstituted Complex |
 |
Homo sapiens |
Co-fractionation |
 |
Homo sapiens |
Affinity Capture-MS |
 |
Homo sapiens |
Affinity Capture-MS |
 |
Homo sapiens |
Affinity Capture-MS |
 |
Homo sapiens |
|
86 |
CUL3 |
8452 |
Affinity Capture-MS |
 |
Homo sapiens |
|
87 |
EGFR |
1956 |
Affinity Capture-MS |
 |
Homo sapiens |
Negative Genetic |
 |
Homo sapiens |
|
88 |
THOC5 |
8563 |
Co-fractionation |
 |
Homo sapiens |
|
89 |
EIF2B3 |
8891 |
Co-fractionation |
 |
Homo sapiens |
|
90 |
FN1 |
2335 |
Affinity Capture-MS |
 |
Homo sapiens |
|
91 |
RFC1 |
5981 |
Co-fractionation |
 |
Homo sapiens |
Co-fractionation |
 |
Homo sapiens |
Co-fractionation |
 |
Homo sapiens |
Reconstituted Complex |
 |
Homo sapiens |
Affinity Capture-MS |
 |
Homo sapiens |
Affinity Capture-MS |
 |
Homo sapiens |
Co-fractionation |
 |
Homo sapiens |
|
92 |
CDK2 |
1017 |
Co-fractionation |
 |
Homo sapiens |
|
93 |
CHTF8 |
|
Affinity Capture-MS |
 |
Homo sapiens |
Affinity Capture-MS |
 |
Homo sapiens |
|
94 |
MYC |
|
Affinity Capture-MS |
 |
Homo sapiens |
Affinity Capture-MS |
 |
Homo sapiens |
|
95 |
RPA3 |
6119 |
Affinity Capture-MS |
 |
Homo sapiens |
Affinity Capture-MS |
 |
Homo sapiens |
Proximity Label-MS |
 |
Homo sapiens |
|
96 |
TOP1 |
7150 |
Affinity Capture-MS |
 |
Homo sapiens |
|
97 |
EPRS |
2058 |
Co-fractionation |
 |
Homo sapiens |
|
98 |
FLII |
2314 |
Co-fractionation |
 |
Homo sapiens |
|
99 |
DDRGK1 |
65992 |
Affinity Capture-MS |
 |
Homo sapiens |
|
100 |
RNF2 |
|
Affinity Capture-MS |
 |
Homo sapiens |
|
101 |
Rpl35 |
66489 |
Affinity Capture-MS |
 |
Mus musculus |
|
102 |
FSCN1 |
6624 |
Affinity Capture-MS |
 |
Homo sapiens |
|
103 |
NELFB |
25920 |
Co-fractionation |
 |
Homo sapiens |
|
104 |
NFATC2 |
|
Affinity Capture-MS |
 |
Homo sapiens |
|
105 |
BRD3 |
8019 |
Affinity Capture-MS |
 |
Homo sapiens |
Affinity Capture-MS |
 |
Homo sapiens |
|
106 |
XRCC5 |
7520 |
Co-fractionation |
 |
Homo sapiens |
|
107 |
RPS16 |
6217 |
Affinity Capture-MS |
 |
Homo sapiens |
|
108 |
HIF1A |
3091 |
Affinity Capture-MS |
 |
Homo sapiens |
|
109 |
TAF6 |
6878 |
Affinity Capture-MS |
 |
Homo sapiens |
|
110 |
HNRNPCL2 |
440563 |
| | |